zbmed-semtec Goto Github PK

biohackoutcomes

BioHackathon project to define and follow up BioHackathon projects

biomedsem-ir-kd

A course on Biomedical Semantics, Information Retrieval and Knowledge Discovery

bioschemas-ghpages-markup-tutorial

A tutorial on how to add Bioschemas markup to GitHub pages

bioschemas-github-markup-example

Repository hosting examples of markup added to GitHub pages, mainly used for tutorials

doc2vec-doc-relevance

An approach exploring and assessing literature-based doc-2-doc recommendations using a doc2vec and applying to TREC and RELISH datasets

dome-galaxy-training

Training materials about the DOME recommendations with a Galaxy tutorial as use case

fairification-game-4rs-data

This repository is used to mock research software repositories (via folders) used in the "FAIRification game for Research Software".

hybrid-pre-doc2vec-doc-relevance

Hybrid approach combining dictionary-based NER and doc2vec

m4ml

A data repository to save ML-related metadata crosswalks

masmps

Metadata model for machine-actionable Software Management Plans

masmps-metadata-extraction

This repository supports metadata extraction aligned to the maSMP metadata schema

mlentory-etl-pipeline

This repository aims at exploring APIs from different ML-related platforms so we can harvest and harmonize data from them

mowl-graph2doc2vec

A repository to explore the use of ontology-based graphs (generated with MOWL) as background knowledge for scientific publications.

ontoclue

OntoClue - An ontology-based approach for finding and creating clusters useful for life sciences literature-based knowledge discovery

protein-function-embeddings-thesis

sample-smp-code-repo

Sample code repository to use as an example to extract metadata for ELIXIR SMPs

somef-fork

Use of SOftware Metadata Extraction Framework (SOMEF) for the use case of Software Management Plans

topic-categorization-system

Topic categorization on scientific papers to improve information retrieval in the biomedical domain.

trec-doc-2-doc-relevance

doc-2-doc relevance assessment on PMIDs used in the TREC 2005 Genomics track

w3id.org

Website source code for w3id.org.

wmd-word2vec

word2doc2vec-doc-relevance

An approach exploring and assessing literature-based doc-2-doc recommendations using word2vec combined with doc2vec, and applying it to TREC and RELISH datasets

zbmed-semtec.github.io

GitHub pages for the Semantic Technologies team at ZB MED