zhangjingwen97 Goto Github PK

apolloh

Hidden Markov model (HMM) for predicting somatic loss of heterozygosity and allelic imbalance in whole tumour genome sequencing data.

ascat

ASCAT copy number R package

awesome-ml-for-cybersecurity

:octocat: Machine Learning for Cyber Security

awesome-rspapers

Recommender System Papers

battenberg

Battenberg R package for subclonal copynumber estimation

coursera-ml-andrewng-notes

吴恩达老师的机器学习课程个人笔记

fandangoscorecomparison

Fandango Score Comparison

gatk

Official code repository for GATK versions 4 and up

handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

hmmcopy

Calls Copy Number Variants on sequencing data from cancer patients

hrdetect

Workflow for the sigtools and HRdetect R packages

hrdtools

hsuantienlin_machinelearning

ichorcna

Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

leetcode_101

LeetCode 101：和你一起你轻松刷题（C++）

picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

pydata-book

Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media

r-for-data-science

R for Data Science SUMMARY

r_bilibili

scarhrd

tabby

A terminal for a more modern age

titancna

Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer

unrate

data visualization using unrate.csv