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cmake-modules

CMake module collection

coloc.susie

cromwell

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

cxxopts

Lightweight C++ command line option parser

demo_code

exptools

Docker tools for cloud, tools in R and Python

gdriveupload

A command line utility for interacting with Google Drive and Team Drive

gruvbox

Retro groove color scheme for Vim

gtest-cmake-example

A sample project using GoogleTest with CMake

gwasmp

hamming_weight

C library to compute the Hamming weight of arrays

hdf5convert

A program to transfer in house hdf5 data

impute-pipe

:shower: Canonical SGE cluster genotype imputation pipeline

iswasmfast

Performance comparison of WebAssembly, C++ Addon, and native implementations of various algorithms in Node.js.

joint-calling

Sample and variant QC, based on https://github.com/broadinstitute/gnomad_qc

jquery.tocify.js

A jQuery Table of Contents plugin that can be themed with Twitter Bootstrap or jQueryUI.

ldpred-funct

Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337

libpopcnt

🚀 Fast C/C++ bit population count library

llvm-utils

LLVM/Clang for Visual Studio 2019, 2017, 2015, 2013, 2012 and 2010. Utils for Clang Static Analyzer

monaco.ttf

the monaco font improved: add special characters in monaco.ttf

mrfdepth

:exclamation: This is a read-only mirror of the CRAN R package repository. mrfDepth — Depth Measures in Multivariate, Regression and Functional Settings. Homepage: https://github.com/PSegaert/mrfDepth Report bugs for this package: https://github.com/PSegaert/mrfDepth/issues

mrnd

Power calculations for Mendelian Randomisation

open-in-buttons-for-finder-toolbar

Open in TextMate, open in VS Code buttons for Finder toolbar

pheweb

A tool to build multi-phenotype GWAS browsers

plink-ng

Fork for Pgen library. Only patches for library uses, nothing new. Please refer to plink-ng repository

polyfun

PolyFun (POLYgenic FUNctionally-informed fine-mapping)

qsubshcom

qsub command for serveral cluster engine

sbayesrc

sisg_mcmc_course

Lecture notes for Eric Anderson and Matthew Stephens SISG course on MCMC for Statistical Genetics