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albo

Automatic lesion to brain region overlap

atlas-r2.0---stroke-lesion-segmentation

ATLAS R2.0 - Anatomical Tracings of Lesions After Stroke

bentbx

A new version of the entropy calculation code of the BENtbx

braingraph

Graph theory analysis of brain MRI data

brainnetclass

brainradiomicstools

A radiomics tool with a variety of brain MRI processing functions, including affine registration, hippocampus segmentation and feature calculation.

bspmview

MATLAB program for viewing 3D fMRI statistical images

cbig

chatgpt

🔮 ChatGPT Desktop Application (Mac, Windows and Linux)

chatgpt_academic

科研工作专用ChatGPT/GLM拓展，特别优化学术Paper润色体验，模块化设计支持自定义快捷按钮&函数插件，支持代码块表格显示，Tex公式双显示，新增Python和C++项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持gpt-3.5/gpt-4/chatglm

chinese-std-gb-t-7714-related-csl

GB/T 7714相关的csl以及Zotero使用技巧及教程。

chord_diagram

A circos-style chord diagram in R for visualizing networks

commands

cudimot

CUDA Diffusion Modelling Toolbox

ddshop

叮咚买菜自动抢购下单程序

dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

easylearn

Easylearn is designed for machine learning mainly in resting-state fMRI, radiomics and other fields (such as EEG). Easylearn is built on top of scikit-learn, pytorch and other packages. Easylearn can assist doctors and researchers who have limited coding experience to easily realize machine learning, e.g., (MR/CT/PET/EEG)imaging-marker- or other biomarker-based disease diagnosis and prediction, treatment response prediction, disease subtyping, dimensional decoding for transdiagnostic psychiatric diseases or other diseases, disease mechanism exploration and etc.

edge-centric_demo

demo code edge-centric functional connectivity (eFC); Faskowitz et al. (2020)

enigma

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

fsbrain

GNU R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data, e.g. cortical thickness, for individual subjects and groups.

fsl-scripts

Script-framework using FSL, Freesurfer and AFNI functionality for automatization and high-throughput processing of MRI data in clustered environments.

geo

graicar

A exploratory tool for sub-group discovery in functional neuroimaging data

hcppipelines

A BIDS App for minimal preprocessing using the HCP Pipelines

hcppipelines-1

Processing pipelines for the HCP

hmm-mar

Toolbox for segmentation and characterisation of transient connectivity

ischemic-stroke-lesion-segmentation

lc_private_codes

lc_rsfmri_tools_matlab

resting-state fmri tools

lzl

anatomical MRI