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dockerfiles

docker files for dockerhub

drugchat

DrugChat: Towards Enabling ChatGPT-Like Capabilities on Drug Molecule Graphs

dsdp

Deep Site and Docking Pose (DSDP) is a blind docking strategy accelerated by GPUs, developed by Gao Group. For the site prediction part, several modifications are introduced to PUResNet program. The pose sampling part is similar as AutoDock Vina combined with a number of modifications.

ewce

Expression Weighted Celltype Enrichment

gprim

primitives for working with statistical genetic data

graphbasedclustering

Code from "Graph-based data clustering via multiscale community detection" by Z Liu and M Barahona, Applied Network Science, 5 (3) (2020). See also: https://wwwf.imperial.ac.uk/~mpbara/Partition_Stability/

magma_celltyping

Identify cell types underlying the associations found in GWAS summary statistics

paddlehelix

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

partitionstability

rnaseq

RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control

sldp

Signed LD profile regression code

splinegp

SplineBasisGP