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atom

:atom: The hackable text editor

bactome

Toolbox for Studying Bacteria, Archaea, and Complex Taxons

binf-scripts

A collection of useful bioinformatics scripts.

bioinfo-pipelines

Sample bioinfo script collection.

biostar-engine

Software for better science

chatgpt-mac

ChatGPT for Mac, living in your menubar.

comparative_genomics

Toolbox for comparative genomics

fluentdna

FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.

interproscan

metacache

memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping

microbedb

Provides a local database of in-house and published genomes for Bacteria and Archaea from NCBI

mixcr

MiXCR is a universal software for fast and accurate extraction and downstream analysis of T- and B- cell receptor repertoires from any type of sequencing data. Free for academic use only.

pasapipeline

PASA software

perl_classification_of_document

le but de ce programme est de prendre 5 documents text (contenat 5 domaine differents ) est les classifier selon leur domaine pour une solusion on propopse de creer 5 dic contenant des termes specifique a chaque domaines et calculer la distance entre chaque dic (vect de mots) et fichier text(vecteur de mots) et enfin prendre la valeur maximal le but de ce programme est de prendre 5 documents text (contenat 5 domaine differents ) est les classifier selon leur domaine pour une solusion on propopse de creer 5 dic contenant des termes specifique a chaque domaines et calculer la distance entre chaque dic (vect de mots) et fichier text(vecteur de mots) et enfin prendre la valeur maximal le dossier dico :contient les dictionnaires poue executer le programme ; 1-extract classification.rar,document.rar,document 2-change the path of your folder in this line my $RepBase = 'D:\WorkSpace\eclips\Perl_KNN/document'; my $RepResult = 'D:\WorkSpace\eclips\Perl_KNN/classification'; my $RepDico = 'D:\WorkSpace\eclips\Perl_KNN\dico'; to my $RepBase = 'D:\WorkSpace\eclips\Name_of your folder/document'; my $RepResult = 'D:\WorkSpace\eclips\Name_of your folder/classification'; my $RepDico = 'D:\WorkSpace\eclips\Name_of your folder\dico'; Enjoy!

pubdata

Smart search engine for all bioinformatics databases worldwide

python-100-days

Python - 100天从新手到大师

repbase

repbase-1

rna-bloom

:hibiscus: fast and memory-efficient de novo assembler for bulk and single-cell RNA-seq data

styleclip

Official Implementation for "StyleCLIP: Text-Driven Manipulation of StyleGAN Imagery" (ICCV 2021 Oral)

taxco

Correlation Analysis for Taxonomic Data

tcoffee

A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence

te-splitter

Extract terminal repeats from retrotransposons (LTRs) or DNA transposons (TIRs). Compose synthetic MITES from complete DNA transposons.

te_finder

A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.

teaching_book

the-biohacking-bible

:pill: :pill: :pill: :pill: :pill: Lots of resources on the world of Biohacking, Genetic Editing, Biology, Bacteria, DNA, CRISPR, Cas9, Plasmids, Antibiotics, PCR, and moooreeeee... :pill: :pill: :pill: :pill: :pill: IN CELL WE TRUST!!! :pill: :pill: :pill: :pill: :pill:

trimal

A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 1.4

vdb

very dreamy blast: an easy to use wrapper for blastn_vdb and tblastn_vdb

vigen

viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data

webservice-clients

A collection of Web Service Clients to consume EBI's tools via REST and SOAP APIs.