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Anthony Bretaudeau's Projects

orthofinder icon orthofinder

Accurate inference of orthologous gene groups made easy. "OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthologous gene group inference accuracy"

parsec icon parsec

Access Galaxy at the speed of light with automatically generated BioBlend wrappers

planemo icon planemo

Command-line utilities to assist in developing tools for the Galaxy Project.

planemo-machine icon planemo-machine

A packer.io configuration for building out Galaxy (http://galaxyproject.org/) tool development environments.

planemo-monitor icon planemo-monitor

Planemo scripting to monitor repositories and register tool containers.

seek icon seek

For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.

sorting-hat icon sorting-hat

UseGalaxy's very magical job sorting system :sparkles:

staged-recipes icon staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

starforge icon starforge

Build Galaxy dependencies, wheels, and other things, in Docker (and other things)

tiaas2 icon tiaas2

Reusable Training Infrastructure as a Service

tools-au icon tools-au

A home for local tool wrappers on Galaxy Australia and a testing ground for changes to existing wrappers

tools-devteam icon tools-devteam

Contains a set of Galaxy Tools mostly written by the Galaxy Team.

tools-galaxyp icon tools-galaxyp

Galaxy Tool Shed repositories maintained and developed by the GalaxyP community

tools-iuc icon tools-iuc

Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission

tripal icon tripal

The Tripal "core" package, a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage at http://tripal.info for documentation, support, and other information. Please use the Drupal project's issue queue at https://www.drupal.org/project/issues/tripal for bug reports and requests.

tripal_analysis_blast icon tripal_analysis_blast

This module extends the Tripal Analysis Module and provides a method for loading XML results from the NCBI blast program. Blast results appear on each feature page.

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