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gnn_playground

gnn_plus_hic

Clustering Hi-C contact map using graph neural networks. Utilities and data pipelines. Created as part of Bioinformatics institute spring 2022 project

graphcast

graphmb

graphmb_for_hic

Temporary repo for modified for Hi-C GNN clustering by GraphMB

handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

hicbin

HiCBin: binning metagenomic contigs and recovering metagenome-assembled genomes using Hi-C contact maps

ib-2022-statistics

Repo for statistics homeworks

islr-python

An Introduction to Statistical Learning (James, Witten, Hastie, Tibshirani, 2013): Python code

kaggle-api

Official Kaggle API

leetcode

Leetcode solutions

mackup

Keep your application settings in sync (OS X/Linux)

ml

ml-course

Open Machine Learning course

ml-intro

Repository for Introduction to Machine Learning course

ml_death_star

Shortcuts & pipelines for ML projects. May the Force be with them!

mri-semantic-segmentation

MRI-semantic-segmentation

nirvana_cifar_10_example

nlp_course

YSDA course in Natural Language Processing

nn_synthetic_playground

parsing-of-electronic-medical-records

Result of the beginning task for students

playground

My bioinformatics

ppi_gnn

ppi_meets_gnn_lm

practical_dl

DL course co-developed by YSDA, HSE and Skoltech

practical_rl

A course in reinforcement learning in the wild

practise

python-glmnet

A python port of the glmnet package for fitting generalized linear models via penalized maximum likelihood.

repseq-annotation-tutorial

📝 [Tutorial] RepSeq data mining basics in R