Tool for encapsulating, running, and reproducing projects with Conda environments

This package is intended as a successor to Anaconda Project. Please continue to use Anaconda Project until it has been delcared deprecated and Conda Project has stabilized.

To setup conda-project for development, first install Miniconda, then

1. Clone this repository.
2. Create a development environment using the environment.yml file in this repository

   conda env create -p ./env
   

3. Install conda-project as editable in the env by activating the environment first

   conda activate ./env
   pip install -e .
   

To run tests you can either activate the env and run pytest

conda activate ./env
pytest

or use conda run

conda run --no-capture-output -p ./env pytest

This project uses pre-commit to aid with linting. Pre-Commit is configured to run

• isort
• black
• flake8

This repository is configured with Pre-Commit.ci, which will automatically fix Pull Requests to comply with the above linters.

The pre-commit Conda package is included in the development environment.yml file. To install the hooks in your local clone run

conda run --no-capture-output -p ./env pre-commit install

Once configured the pre-commit hooks are run automatically, but you can run them manually with

conda run --no-capture-output -p ./env pre-commit run --all-files