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dryad

This is a research prototype of the Dryad and DryadLINQ data-parallel processing frameworks running on Hadoop YARN.

dslabs

Data Science Labs R package: includes functions and data for data science courses

dsub

Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.

dx-toolkit

DNAnexus platform client libraries.

dynamic-nmf

Dynamic Topic Modeling via Non-negative Matrix Factorization

dynamics-practical

Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data

ea-utils

Automatically exported from code.google.com/p/ea-utils

easytensorflow

This package provides users with methods for the automated building, training, and testing of complex neural networks using Google's Tensorflow module. The project includes objects that perform both regression and classification tasks.

ebfilter

empirical bayesian mutation filtering

ec2

Amazon EC2 plugin for CakePHP

ecopredtools

Tools for researching ecological predictability

edx

Course materials for the edX Data Analysis for Genomics

efficientscalablelab

package for 'Management and analysis of large genomic data' lab

eg

EpiGenome Gateway - WashU EpiGenome Browser

egc.tools

USC Epigenome Center packaging tools for TCGA

eggnog-mapper

Fast genome-wide functional annotation through orthology assignment

eigen

Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers, and related algorithms.

elapsed-time-pairwise-functions

An analysis of regressors on elapsed time in pairwise functions in R.

elasticluster

Create clusters of VMs on the cloud and configure them with Ansible

emase

Welcome to EMASE github repository!

emase-zero

C++ Version of EMASE

emdunifrac

Computation of Unifrac using Earth Movers Distance

emu

An Expectation-Maximization algorithm to infer mutational signatures

ena-submission

Tool for easing the submission of data to the ENA

enar2016

Introduction to High Throughput Data Analysis Using R / Bioconductor

encodernaseqevaluation

enrichment

Over-representation and Rank enrichment analysis

ensime-emacs

ENhanced Scala Interaction Mode for Emacs

ensime-sbt

Generates .ensime config files for SBT projects

epicpcr

Scripts to parse sequence data from Emulsion, Paired Isolation, and Concatenation PCR