amunozj / magnetograph_2hmi_converter Goto Github PK

python convert2HMI.py --instrument mdi --data_path ../solarmag/ --destination ../solarmag/ --use_patches

2021-04-28 - 23:21:15 INFO __main__: Processing ../solarmag/mdi.fd_m_96m_lev182.20110331_013600_TAI.data.fits
2021-04-28 - 23:21:15 INFO __main__: Attempting inference on patches...
2021-04-28 - 23:21:26 INFO __main__: Success.
2021-04-28 - 23:21:26 INFO __main__: Processing ../solarmag/hmi.m_720s.20110331_013600_TAI.1.magnetogram.fits
2021-04-28 - 23:21:37 INFO __main__: Attempting inference on patches...
2021-04-28 - 23:24:25 INFO __main__: Success.
Traceback (most recent call last):
  File "convert2HMI.py", line 182, in <module>
    inferred_map = file_dset.create_new_map(inferred, scale_factor, args.add_noise, model_name, config_data, padding)
  File "/content/magnetograph_2HMI_converter/source/dataset.py", line 58, in create_new_map
    new_meta['r_sun'] = new_meta['r_sun'] * scale_factor
  File "/usr/local/lib/python3.7/dist-packages/sunpy/util/metadata.py", line 48, in __getitem__
    return OrderedDict.__getitem__(self, key.lower())
KeyError: 'r_sun'

ERROR: Cannot install -r requirements.txt (line 18) and tensorboard==1.14.0 because these package versions have conflicting dependencies.

The conflict is caused by:
    The user requested tensorboard==1.14.0
    tensorflow 1.15.4 depends on tensorboard<1.16.0 and >=1.15.0

To fix this you could try to:
1. loosen the range of package versions you've specified
2. remove package versions to allow pip attempt to solve the dependency conflict

conda create -n hmi-mag python==3.7
pip install -r requirements.txt --no-cache-dir

    ERROR: Command errored out with exit status 1:
     command: /home/paul/anaconda3/envs/hmi-mag-3.9/bin/python -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-moej_o98/scikit-image_e611f07ec3a447228c0e8778b80f12fd/setup.py'"'"'; __file__='"'"'/tmp/pip-install-moej_o98/scikit-image_e611f07ec3a447228c0e8778b80f12fd/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /tmp/pip-pip-egg-info-o1fn1vyv
         cwd: /tmp/pip-install-moej_o98/scikit-image_e611f07ec3a447228c0e8778b80f12fd/
    Complete output (5 lines):
    Traceback (most recent call last):
      File "<string>", line 1, in <module>
      File "/tmp/pip-install-moej_o98/scikit-image_e611f07ec3a447228c0e8778b80f12fd/setup.py", line 31, in <module>
        from numpy.distutils.command.build_ext import build_ext
    ModuleNotFoundError: No module named 'numpy'
    ----------------------------------------
WARNING: Discarding https://files.pythonhosted.org/packages/e0/46/ca035f5d7d3414124a3a5ef22cd2e75c0c5149042a668375f1d44eb69f8f/scikit-image-0.15.0.tar.gz#sha256=df111e654b47e5ea456c50553debe4c5ddd97258894c7ad3b7f2f9f10798e053 (from https://pypi.org/simple/scikit-image/) (requires-python:>=3.5). Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
ERROR: Could not find a version that satisfies the requirement scikit-image==0.15.0
ERROR: No matching distribution found for scikit-image==0.15.0

conda create -n hmi-mag-3.9 python==3.9
conda activate hmi-mag-3.9
pip install -r requirements.txt --no-cache-dir