Comments (2)
ahah ok I got you need to launch the callVarBamParallel in the command prompt to get the commands.sh
sorry!
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No problem.
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Related Issues (20)
- program crashes internally but still writes VCF and successfully returns 0 HOT 1
- High runtime, high memory, low precision and recall using NA12878 data HOT 2
- GetTruth.py: error: unrecognized arguments: --noGT 1 HOT 13
- cannot connect to X server localhost HOT 2
- trainedModels directory HOT 1
- TrainingModels and new Bam file HOT 1
- Non-human data? HOT 1
- Failed to tabix the generated vcf files HOT 2
- callVarBam.py fails with taskset: failed to set pid 0's affinity: Invalid argument HOT 1
- SNV report is not consistent with the bam file HOT 1
- Is model of human genome applicable to variant calling on bacterial data ? HOT 1
- Applying full support for the IUPAC nucleotide code standard for better robustness? HOT 4
- Does the pacBio model you have trained can be used for PacBio CCS reads? HOT 1
- GPU conda install docs remove Clairvoyante HOT 2
- How is the QUAL metric calculated? HOT 2
- Check that BAM is indexed HOT 1
- PyPy HOT 1
- PacBio hifi HOT 1
- BAM:the genome region you specified has no read cover HOT 2
- No output in commands.sh HOT 1
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