australianbiocommons Goto Github PK
Type: Organization
Bio: Documentation for the development, deployment and/or optimisation of key community-endorsed bioinformatics tools and workflows
australianbiocommons's Projects
guides_v2_test
hifi-assembly-workflow
Nextflow workflow for Hifi Genome Assembly
how-to-doc-guidelines
How-to use the Australian BioCommons documentation guidelines
how-to-guide-template
how-to-guide-template-test
how-to-guides
This site presents How-to-Guides and other associated documentation that supports the reuse of bioinformatics tools, workflows and data on Australian compute systems and infrastructure.
how-to-hub
This central hub links to step-by-step How-to Guides, and associated documents, that support the reuse of bioinformatics tools, workflows and data on Australian compute systems and digital research infrastructure.
how_to_findable_citable_software
human-omics-data-sharing-field-guide
Prototype for Human Genomics Data Sharing Field Guide Website
ipa
Improved Phased Assembler: structured documentation and results of testing for Australian compute infrastructures
iwc-template
kookaburra_monitoring
learning-library
migrate
Migrate: structured documentation and results of testing for Australian compute infrastructures
nextflow-seqera
Documenation and user guides for the Australian Nextflow Seqera Service
nextflow_dsl2_template
Template for creating Nextflow DSL2 pipelines
nfta-launcher
Nextflow Tower Agent Launcher script
pacbio-hifi-genome-assembly-using-hifiasm
Assembly, visualisation and quality control workflow for high fidelity reads built from circular consensus sequence (PacBio HiFi) data.
pathway_mapping_tools
purge-duplicates-from-hifiasm-assembly
Optional workflow to purge duplicates from the contig assembly.
rems-aws-deploy
rems-scripts
Useful code and documentation for interacting with a REMS instance
rems_gen3_mediator
An app to mediate between rems and gen3, syncing gen3 resources to REMS and adapting entitlement requests to gen3.
ssjdispatcher
SQS S3 Job Dispatcher
toolfinder
umccr-dictionary
UMCCR Data Dictionary
xml4ena
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