bartbols / mushar-toolbox Goto Github PK

Hi Bart!

I am Balint again, I think it is better to address my question here if maybe somebody has the same issue :)
I am just wondering how to generate a similar figure to the

provided images.
Thank you for your help again!

Best wishes,
Bálint

Dear Bart!

My name is Yang Song from the Hong Kong Polytechnic University. I am working on a muscle shape project, and I found your MUSHAR Matlab tools. 🙂

I followed your instructions and installed and made available in the enviromental variables's path both the shapeworks (6.2.1) and the elastix (4.7) as well. The first script run without any error message and do the signed distancemaps files however it does not create the absolute distanmaps. The abs folder is empty where the second script wants to read the files.

I only try with the example files so far but I don't know what could be the problem. Because no error message appears and debugging also didn't reveal the problem I cannot be more specific. May I ask your help about this problem? If you have any suggestions I would appreciate it very much!

Hi Bart, I've been playing with the B-Spline registration and I was wondering whether this line should be

<(FinalGridSpacingInPhysicalUnits 10 10 10)>

rather than

<(FinalGridSpacingInPhysicalUnits 20 20 20)>

if it's from 10mm grid spacing. I can't see a difference between this file (parameters_BSpline10.txt) and the parameters_BSpline20.txt file and thought this may be it.

Thanks, Jen