More than 12+ years experience of experience as bioinformatician in industrial and academic settings of data analysis for first and second-generation technologies and development of web based tools.
Data analysis pipelines
RNA-Seq expression Variant calling Denovo Genome assembly Single cell genome miRNA Denovo Trans assembly Exome Analysis Meta-Genomics Meta- transcriptomics Pathway analysis
Bioinformatics Tools & Programming STAR HISAT TopHat2 Trinity SOAP-denovo2 GATK IPA JMP-genomics Cufflinks Cuffdiff DeSeq2 EdgeR Samtools bowtie2/bwa Bioconda Bio-conductor Sequencher Primer3 QIIME Perl MySQL HTML PHP R
Job schedulers &Operating systems SLURM & PBS Linux MS Windows MacOS
Other Experiences
De-multiplexing Web tools development Conducting training