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BenoitMorel avatar BenoitMorel commented on August 23, 2024

Not reproducible on Haswell.
It comes from a system call that redirect with call &> outputfile. For some reason this redirection does not work on my personal computer.

from pargenes.

BenoitMorel avatar BenoitMorel commented on August 23, 2024

Explanation: call &> outputFile makes system non blocking. So mpi-scheduler might terminate when some raxml processes are still running (or some other issue might happen).
I use call > outputFile as a quick fix. Better fix will be to call fork and execv, use the &> indirection and then use the pid to wait for the end of the process and get the return code.
But this will wait for September!

from pargenes.

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