Comments (1)
romainVala
commented on July 24, 2024
Hello
first thanks for providing all this code, and the excellent database (dHCP data)
looking at deep learning segmentation results on the dHCP T1 data I notice some clear mismatch with the EM ground truth whereas this mismatch is not present when I compare the segmentation results obtaine from T2 data
So I was also wondering (but for an other reason) if on can produce the EM segemntation from the T1 images ?
any guidelines for that will be appreciate
Many thanks
from dhcp-structural-pipeline.
Related Issues (20)
- exporting surface files (*.dscalar.nii or *.shape.gii) to freesurfer format HOT 1
- Tissue probability maps are not correctly copied
- Error with T1w/T2w maps
- Segmentation error (with docker image) HOT 10
- Surface error under docker image
- Error with dhcp-structural-pipeline:fetal in docker
- Native install on Big Sur
- Segmentation error HOT 3
- Installation difficulties HOT 1
- Calculate curvature in the script process-surfaces-hemisphere
- mirtk padding failure for tissue labels
- setup.sh Failure HOT 1
- setup.sh failure
- code version for dHCP release 3? HOT 3
- Pipeline outputs
- docker issue apple silicon chips?
- recon-neonatal-cortex error HOT 8
- Surface Reconstruction FAILED, please suggest new parameter values for gaus_curvature and min_width
- Non rigid step failing HOT 2
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from dhcp-structural-pipeline.