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pytometry

This repository extends scanpy to handle flow and mass cytometry data. It provides the functionality to read in flow data in the fcs file format as anndata objects and to use the entire scanpy workflow functionality.

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Suggestion to rename into Nautilopy, following our love for sea animals.

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Trouble importing

Hi, I tried importing Pytometry and this is the error I receive:

Python 3.9.13 | packaged by conda-forge | (main, May 27 2022, 16:50:36) [MSC v.1929 64 bit (AMD64)] on win32
Type "help", "copyright", "credits" or "license" for more information.

import pytometry as pm
Traceback (most recent call last):
File "", line 1, in
File "C:\ProgramData\Anaconda3\envs\py39\lib\site-packages\pytometry_init_.py", line 25, in
from . import plotting as pl
File "C:\ProgramData\Anaconda3\envs\py39\lib\site-packages\pytometry\plotting_init_.py", line 1, in
from .histogram import plotdata
File "C:\ProgramData\Anaconda3\envs\py39\lib\site-packages\pytometry\plotting_histogram.py", line 5, in
from anndata import AnnData
File "C:\ProgramData\Anaconda3\envs\py39\lib\site-packages\anndata_init.py", line 7, in
from .core.anndata import AnnData
File "C:\ProgramData\Anaconda3\envs\py39\lib\site-packages\anndata_core\anndata.py", line 17, in
import h5py
File "C:\ProgramData\Anaconda3\envs\py39\lib\site-packages\h5py_init.py", line 33, in
from . import version
File "C:\ProgramData\Anaconda3\envs\py39\lib\site-packages\h5py\version.py", line 15, in
from . import h5 as _h5
File "h5py\h5.pyx", line 1, in init h5py.h5
ImportError: DLL load failed while importing defs: The specified procedure could not be found.