burkesquires Goto Github PK

leaflims

**PLEASE NOTE: Due to lack of funding Leaf LIMS is no longer being developed/updated**. Set up Leaf LIMS on your own system.

learn-python

📚 Playground and cheatsheet for learning Python. Collection of Python scripts that are split by topics and contain code examples with explanations.

learn_to_code

Resources for budding developers

linux

Linux kernel source tree

lolviz

A simple Python data-structure visualization tool for lists of lists, lists, dictionaries; primarily for use in Jupyter notebooks / presentations

lsgraph

An application supporting reskilling and upskilling for both organisations and individuals

macos-simple-kvm

Tools to set up a quick macOS VM in QEMU, accelerated by KVM.

magpie

Git-backed Evernote replacement

mask_rcnn

Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

medialootr

medic

a Python 3 command-line tool to maintain a DB mirror of MEDLINE (https://pypi.python.org/pypi/medic) - ALERT: As I have moved out of science and am working as a consultant now, this project might need a new maintainer once PubMed changes its XML format. Heroes?

nanopore-scripts

Various scripts and recipes for working with nanopore data

nbopen

Open an IPython notebook in the best available server

ncbi_jupyter

A variety of NCBI Computational Tools Distributed as Jupyter Notebooks

ncbicomputationalcookbook

Jupyter notebooks to more effectively leverage computational resources at NCBI.

network-analysis-made-simple

For PyCon, PyData, ODSC, and beyond!

ngs-notebooks

ngs-pipeline-ipython-notebook

Next generation sequencing pipeline python notebook

nlm-reproducibility-workshop-2019

NLM Reproducibility Workshop, Rockville, MD - May 15-17, 2019

nlm_reproducibility_workshop

NLM Reproducibility Workshop, NIH Sept 24-26, 2018

node-ffmpeg-mpegts-proxy

Simple proxy for leveraging ffmpeg to convert any source URL into MPEG-TS over HTTP

norovirus_variability

Norovirus variability isolation year versus residue difference computation

notebook

My personal and public notes.

octotagger

Cross platform tag based file management software.

organization-rr-jupyter

Data and project organization for Reproducible Research with the Jupyter notebook curriculum

organize

The file management automation tool.

packtpub-library-downloader

Script to download all your PacktPub ebooks and videos

packtsnatch

Script for ordering and downloading ebooks from packtpub freelearning page

pandas_exercises

Practice your pandas skills!

pomegranate

Graphical models for Python, implemented in Cython for speed.