Giter VIP home page Giter VIP logo

dartr.spatial's Introduction

dartR.spatial

An accessible genetic analysis platform for conservation, ecology and agriculture - dartR.spatial

Repositories

repo status
main main
dev dev

Publication:

Zenodo: DOI

Overview

dartR.spatial aims to support analysis of SNP data in a spatial context. For example running a least-cost-path analysis or simple isolation by distance plots. There is also a function that calculates spatial autocorrelation.

dartR.spatial is one package of the dartRverse. Currently the dartRverse consists of the following packages:

  • dartR.base (report, filter and input/output functions, basic popgenomics)
  • dartR.data (repository for example data files)
  • dartR.sim (functions to simulate SNP data)
  • dartR.spatial (spatial analysis <- this package)
  • dartR.popgenomics (popgenomics analysis)
  • dartR.sexlinked (under development)

dartR and its packages is a collaboration between the University of Canberra, CSIRO and Diversity Arrays Technology, and is supported with funding from the ACT Priority Investment Program, CSIRO and the University of Canberra.

Installation

For a normal install from CRAN use:

install.packages("dartR.spatial")

For hints and how to install github versions, check the help pages of the dartRverse package.

Contribute

If you want to help shape the future of dartR, this tutorial is for you.

Citation

Please acknowledge dartR if you use it in your study. Copy and paste the following code to the R console to retrieve the citation information:

citation("dartR.spatial")

Check out our articles and our awards.

Have fun working with dartR!

Cheers,

Bernd, Arthur, Luis, Carlo & Olly

dartr.spatial's People

Contributors

green-striped-gecko avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.