- executable to find contacts: https://github.com/LilySnow/PDB_related/blob/master/contact-chainID_allAtoms
- pytorch 2.1 : https://pytorch.org/
- python 3.10 : https://www.python.org/
- biopython 1.75 : https://biopython.org/
./count_all.py <path to contact-chainID_allAtoms exectable> <list of pdb files> <number of simultaneous workers> <output matrix file>