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cchic-to-ohdsi's Introduction

cchic-to-ohdsi

A package to convert the cchic data structures to the OHDSI version 6 CDM

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James Cloos avatar Steve Harris avatar Finn Catling avatar  avatar  avatar Claire Black avatar

cchic-to-ohdsi's Issues

Ethnicity = Race and Ethnicity not used

NOTE:
OMOP conventions:
Race (this is what we would call ethnicity)
Ethnicity (hispanic vs. not hispanic).

We do not have a concept of hispanic vs. not hispanic in the UK. So all "ethnicity" in CC-HIC OMOP is 0. Race is being used for what we would call ethnicity.

Race - NOT NULL

Race is NOT NULL. There is an option in the 2011 census data for "ethnicity not stated". This is an expression of a person not wanting to declare their ethnicity, which is different to us not knowing it. Since this cannot be coded in OMOP, this is all compressed into concept_id 0

Therefore anything missing or declared as us not knowing are now concept_id 0

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