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sample-external-issuer

External issuers extend cert-manager to issue certificates using APIs and services which aren't built into the cert-manager core.

This repository provides an example of an External Issuer.

Install

kubectl apply -f https://github.com/cert-manager/sample-external-issuer/releases/download/v0.1.0/install.yaml

Demo

You can run the sample-external-issuer on a local cluster with this command:

make kind-cluster deploy-cert-manager docker-build kind-load deploy e2e

How to write your own external issuer

If you are writing an external issuer you may find it helpful to review the code and the commits in this repository and to follow the steps below, replacing references to sample-external-issuer with the name of your project.

Prerequisites

You will need the following command line tools installed on your PATH:

You may also want to read: the Kubebuilder Book and the cert-manager Concepts Documentation for further background information.

Create a test cluster

We will need a Kubernetes cluster on which to test our issuer and we can quickly create one using kind.

kind create cluster

This will update your KUBECONFIG file with the URL and credentials for the test cluster. You can explore it using kubectl

kubectl get nodes

This should show you details of a single node.

Create a repository

We need a Git repository to track changes to the issuer code. You can start by creating a repository on GitHub or you can create it locally.

mkdir sample-external-issuer
cd sample-external-issuer
git init

Initialise a Go mod file

A Go project needs a go.mod file which defines the root name of your Go packages.

go mod init github.com/cert-manager/sample-external-issuer

Initialise a Kubebuilder project

kubebuilder init  --domain example.com --owner 'The cert-manager Authors'

This will create multiple directories and files for building and deploying your project. Notably, these files include:

  • Makefile: various commands useful for development and deployment
  • config/: various kustomize configuration files.
  • Dockerfile: used to statically compile the issuer and package it as a "distroless" Docker image.
  • main.go: the issuer's main entry point.

Run the controller-manager

With all these tools in place and with the project initialised you should now be able to run the issuer for the first time.

make run

This will compile and run the issuer locally and it will connect to the test cluster and log some startup messages. We will add more to it in the next steps.

Creating Issuer and ClusterIssuer custom resources

An External Issuer must implement two custom resources for compatibility with cert-manager: Issuer and ClusterIssuer

NOTE: It is important to understand the [Concept of Issuers] before proceeding.

We create the custom resource definitions (CRDs) using kubebuilder using the following commands; you'll be prompted to create APIs and controllers and you can answer y to all of the prompts.

kubebuilder create api --group sample-issuer --kind Issuer --version v1alpha1
kubebuilder create api --group sample-issuer --kind ClusterIssuer --version v1alpha1 --namespaced=false

The values we pass to these commands specify the GVK (group, version, kind):

  • group is the name given to a collection of custom resource APIs
  • kind is the name of an individual resource in that group
  • version allows you to create multiple versions of your APIs as they evolve, whilst providing backwards compatibility for clients using older API versions

These commands will have created some boilerplate files and directories: api/ and controllers/, which we now need to edit as follows:

  • api/v1alpha1/clusterissuer_types.go: Remove the ClusterIssuerSpec and ClusterIssuerStatus and replace them with IssuerSpec and IssuerStatus. This is because both types of issuers share the same configuration and status reporting.

  • controllers/{cluster}issuer_controller.go: Edit the Kubebuilder RBAC Markers. The controller should not have write permission to the Issuer or ClusterIssuer. It should only be permitted to modify the Status subresource.

  • api/v1alpha1/{cluster}issuer_types.go: And finally, remove any placeholder comments from the API files.

After modifying Kubebuilder Markers and API source files you should always regenerate all generated code and configuration, as follows:

make generate manifests

You should see a number of new and modified files, reflecting the changes you made to the API source files and to the markers.

Creating a CertificateRequest controller

We now need a controller to handle cert-manager CertificateRequest resources. This controller will watch for CertificateRequest resources and attempt to sign their attached certificate signing requests (CSR).

Your external issuer will likely interact with your certificate authority using a REST API, so this is the controller where we will eventually need to instantiate an HTTP client, directly or via an API wrapper library. And we will need to get the configuration and credentials for this from the Issuer or ClusterIssuer referred to by the CertificateRequest.

Start by copying the controllers/issuer_controller.go to controllers/certificaterequest_controller.go and modifying its code and comments to refer to CertificateRequest rather than Issuer.

NOTE: You will need to import the cert-manager V1 API and this in turn will pull in a number of transitive dependencies of cert-manager which we will deal with shortly.

import (
...
    cmapi "github.com/cert-manager/cert-manager/pkg/apis/certmanager/v1"
...
)

Next edit main.go and register the new CertificateRequestReconciler in the same way that the IssuerReconciler is registered. You will also need to add the cert-manager API types to the Scheme:

func init() {
...
	utilruntime.Must(cmapi.AddToScheme(scheme))
...
}

The Scheme is how the controller-runtime client knows how to decode and encode the API resources from the Kubernetes API server. So it is important to add all the API types that are used in your issuer.

Finally run make generate manifests again to update all the generated code.

Get the CertificateRequest

The CertificateRequestReconciler is triggered by changes to any CertificateRequest resource in the cluster. The Reconcile function is called with the name of the object that changed, and the first thing we need to do is to GET the complete object from the Kubernetes API server.

The Reconcile function may occasionally be triggered with the names of deleted resources, so we have to handle that case gracefully.

Explore the unit-tests in controllers/certificaterequest_test.go and try running the tests and seeing them fail before updating the controller code. These are table-driven tests which will execute the Reconcile function many times, with inputs supplied as function arguments and also certain inputs that come from the parent object. It also uses a FakeClient which can be primed with a collection of Kubernetes API objects. The test will check the output of the Reconcile function for errors and later we will make it check the changes that have been made to the supplied API objects.

In the implementation we are careful to return Result{}, nil when the CertificateRequest is not found. This tells controller-runtime do not retry. Other error types are assumed to be temporary errors and are returned.

NOTE: If you return an error, controller-runtime will retry with an increasing backoff, so it is very important to distinguish between temporary and permanent errors.

Ignore foreign CertificateRequest

We only want to reconcile CertificateRequest resources that are configured for our external issuer. So the next piece of controller logic attempts to exit early if CertificateRequest.Spec.IssuerRef does not refer to our particular Issuer or ClusterIssuer types.

As before explore the unit-tests and see how we modify the success case, where the IssuerRef does refer to one of our types. And then we add some error cases where the Group or the Kind are unrecognised.

Also note how in the implementation we use the Scheme.New method to verify the Kind. This later will allow us to easily handle both Issuer and ClusterIssuer references.

If there is a mismatch in the IssuerRef we ignore the CertificateRequest.

Check that the CertificateRequest is Approved

Issuers must only sign Approved CertificateRequest resources. If the CertificateRequest has been Denied, then the Issuer should set a Ready condition to False, and set the FailureTime. If the CertificateRequest has been Approved, then the Issuer should process the request.

Issuers are not responsible for approving CertificateRequests. You can read more about the CertificateRequest Approval API in the cert-manager documentation.

Adjust your CertificateRequest controller and the accompanying unit tests to ignore CertificateRequest resources if they are Denied or if they are not Approved. Use the cert-manager API utility package which contains functions for checking the Approved and Denied conditions of a CertificateRequest.

Set the CertificateRequest Ready condition

The External Issuer documentation says the following:

It is important to update the condition status of the CertificateRequest to a ready state, as this is what is used to signal to higher order controllers, such as the Certificate controller, that the resource is ready to be consumed. Conversely, if the CertificateRequest fails, it is important to mark the resource as such, as this will also be used to signal to higher order controllers.

So now we need to ensure that our issuer always sets one of the strongly defined conditions on all the CertificateRequest referring to our Group.

Study the changes and the additional tests. Note that the first thing we do is check whether the Ready condition is already true in which case we can exit early. Note also the use of a defer function which ensures that the condition is always set and that it is always set to false if an error has occurred.

Get the Issuer or ClusterIssuer

The Issuer or ClusterIssuer for the CertificateRequest will usually contain configuration that you will need to connect to your certificate authority API. It may also contain a reference to a Secret containing credentials which you will use to authenticate with with your certificate authority API.

So now we attempt to GET the Issuer or ClusterIssuer and to do this we need to derive a resource name. An Issuer has both a name and a namespace. A ClusterIssuer is cluster scoped and does not have a namespace. So we check which type we have in order to derive the correct name.

If the GET request fails, we return the error so as to trigger the retry-with-backoff behaviour (described above). This allows for situations where the CertificateRequest may have been created before the corresponding Issuer. This case is demonstrated in the unit tests.

Check the Issuer or ClusterIssuer Ready condition

An issuer will often perform some initialisation when it is first created, for example it might create a private key and CA certificate and store those somewhere, and such operations take time. So we give the Issuer and ClusterIssuer resources their own Ready conditions which the IssuerReconciler can set to signal that the initialization is complete and that the issuer is ready and healthy.

The CertificateRequestReconciler should then wait for the Issuer to be Ready before progressing further.

Get the Issuer or ClusterIssuer credentials from a Secret

The API for your CA may require some configuration and credentials and the obvious place to store these is in a Kubernetes Secret. We extend the IssuerSpec to include a URL field and a AuthSecretName, which is the name of a Secret. As usual run make generate manifests after modifying the API source files:

make generate manifests

NOTE: The namespace of that Secret is deliberately not specified here, because that would breach a security boundary and potentially allow someone who has permission to create Issuer resources, to make the controller access secrets in another namespace which that person would not normally have access to.

For this reason, the Secret for an Issuer MUST be in the same namespace as the Issuer. The Secret for a ClusterIssuer MUST be in a namespace defined by cluster administrator, but that is a little more complicated and for now we will concentrate on Issuer Secrets.

Both the IssuerReconciler and the CertificateRequestReconciler are updated to GET the Secret referred to by the Issuer.

Add a new Kubebuilder RBAC Marker to both controllers, permitting them read-only access to Secret resources.

// +kubebuilder:rbac:groups="",resources=secrets,verbs=get;list;watch

Then run make manifests to regenerate the RBAC configuration in config/.

Add the corev1 types to the Scheme in the unit-tests.

NOTE: It has already been added to the main.go Scheme as part of the clientgoscheme.

Write a test to check that if the GET Secret operation fails, the error is returned and triggers a retry-with-backoff. This important because the Secret may not exist at the time the Issuer or CertificateRequest is created.

NOTE: Ideally, we would WATCH for the particular Secret and trigger the reconciliation when it becomes available. And that may be a future enhancement to this project.

In the case of the CertificateRequestReconciler we need to deal with both Issuer and ClusterIssuer types, so we modify the issuerutil function to allow us to extract an IssuerSpec from either of those types.

Issuer health checks

An issuer that connects to a certificate authority API may want to perform periodic health checks and sanity checks, to ensure that the API server is responding and if not, to set update the Ready condition of the Issuer to false, and log a meaningful error message with the condition. This will give early warning of problems with the configuration or with the API, rather than waiting a for CertificateRequest to fail before being alerted to the problem.

Start with an Interface describing the health check operation. For example:

type HealthChecker interface {
    Check() error
}

We don't need to implement it yet, we just need to plug that into the IssuerReconciler and add a fake implementation to the tests so that we can check how the reconciler behaves when the health checks fail.

And since we can't know the Issuer configuration or credentials until we begin reconciling, we need to describe a constructor function type which can build a HealthChecker from an IssuerSpec and some Secret data.

type HealthCheckerBuilder func(*sampleissuerapi.IssuerSpec, map[string][]byte) (HealthChecker, error)

This will be supplied as an IssuerReconciler field, and can be easily faked in the unit-tests.

And finally, since we want the health checks to be performed periodically, we need to make controller-runtime retry reconciling regularly, even when the current reconcile succeeds. We do this by setting the Result.RequeueAfter field of the returned result.

Sign the CertificateRequest

Now we turn back to the CertificateRequestReconciler and think about how we want it to handle the certificate signing request (CSR).

Let's once again assume that the issuer will connect to a certificate authority API. We extend the signer package with a new simple Interface and a factory function definition (for the same reasons given about in the Issuer Health Checks section):

type Signer interface {
    Sign([]byte) ([]byte, error)
}

type SignerBuilder func(*sampleissuerapi.IssuerSpec, map[string][]byte) (Signer, error)

We don't need to implement it yet, we just need to plug that into the CertificateRequestReconciler and add a fake implementation to the tests so that we can check how the reconciler behaves when Sign fails.

If Sign succeeds it returns the bytes of a signed certificate which we then use as the value for CertificateRequest.Status.Certificate. And we add a unit-test for this case.

In the unit-tests, we can use a simple byte string for the certificate, but in E2E tests later we will use real certificate signing requests and real certificates.

An example signer

For the purposes of this example external issuer, we will implement an exampleSigner which implements both the HealthChecker and the Signer interfaces, and which signs the CSR using a static in-memory CA certificate.

In internal/issuer/signer/signer.go you will see that we: decode the supplied CSR bytes, and then sign the certificate using some libraries that were copied from the Kubernetes project. This simple implementation is just sufficient to allow us (later) to perform some E2E tests with cert-manager.

In your external issuer, this is where you will plug in your CA client library, or where you will instantiate an HTTP client and connect to your API.

Notice also that we add two concrete factory functions which are supplied to the IssuerReconciler and CertificateRequestReconciler in main.go.

What about the ClusterIssuerReconciler?

We have so far abandoned development of the ClusterIssuerReconciler, and that's because we want to re-use the IssuerReconciler rather than duplicating everything.

So here we delete the skaffolded controllers/clusterissuer_controller.go and update the issuer_controller.go to handle both types.

As well as juggling the code to handle both types, we: aggregate the Kubebuilder RBAC annotations, and add a new command line flag which allows us to set a --cluster-resource-namespace.

The --cluster-resource-namespace is the namespace where the issuer will look for Secret resources referred to by a ClusterIssuer, since ClusterIssuer is cluster-scoped. The default value of the flag is the namespace where the issuer is running in the cluster.

Logging and Events

We want to make it easy to debug problems with the issuer, so in addition to setting Conditions on the Issuer, ClusterIssuer and CertificateRequest, we can provide more feedback to the user by logging Kubernetes Events. You may want to read more about Application Introspection and Debugging before continuing.

Kubernetes Events are saved to the API server on a best-effort basis, they are (usually) associated with some other Kubernetes resource, and they are temporary; old Events are periodically purged from the API server. This allows tools such as kubectl describe <resource-kind> <resource-name> to show not only the resource details, but also a table of the recent events associated with that resource.

The aim is to produce helpful debug output that looks like this:

$ kubectl describe clusterissuers.sample-issuer.example.com clusterissuer-sample
...
    Type:                  Ready
Events:
  Type     Reason            Age                From                    Message
  ----     ------            ----               ----                    -------
  Normal   IssuerReconciler  13s                sample-external-issuer  First seen
  Warning  IssuerReconciler  13s (x3 over 13s)  sample-external-issuer  Temporary error. Retrying: failed to get Secret containing Issuer credentials, secret name: sample-external-issuer-system/clusterissuer-sample-credentials, reason: Secret "clusterissuer-sample-credentials" not found
  Normal   IssuerReconciler  13s (x3 over 13s)  sample-external-issuer  Success

And this:

$ kubectl describe certificaterequests.cert-manager.io issuer-sample
...
Events:
  Type     Reason                        Age   From                    Message
  ----     ------                        ----  ----                    -------
  Normal   CertificateRequestReconciler  23m   sample-external-issuer  Initialising Ready condition
  Warning  CertificateRequestReconciler  23m   sample-external-issuer  Temporary error. Retrying: error getting issuer: Issuer.sample-issuer.example.com "issuer-sample" not found
  Normal   CertificateRequestReconciler  23m   sample-external-issuer  Signed

First add record.EventRecorder attributes to the IssuerReconciler and to the CertificateRequestReconciler. And then in the Reconciler code, you can then generate an event by executing r.recorder.Eventf(...) whenever a significant change is made to the resource.

You can also write unit tests to verify the Reconciler events by using a record.FakeRecorder.

See PR 10: Generate Kubernetes Events for an example of how you might generate events in your issuer.

End-to-end tests

Now our issuer is almost feature complete and it should be possible to write an end-to-end test that deploys a cert-manager Certificate referring to an external Issuer and check that a signed Certificate is saved to the expected secret.

We can make such a test easier by tidying up the Makefile and adding some new targets which will help create a test cluster and to help install cert-manager.

We can write a simple end-to-end test which deploys a Certificate manifest and waits for it to be ready.

kubectl apply --filename config/samples
kubectl wait --for=condition=Ready --timeout=5s issuers.sample-issuer.example.com issuer-sample
kubectl wait --for=condition=Ready --timeout=5s  certificates.cert-manager.io certificate-by-issuer

You can of course write more complete tests than this, but this is a good start and demonstrates that the issuer is doing what we hoped it would do.

Run the tests as follows:

# Create a Kind cluster along with cert-manager.
make kind-cluster deploy-cert-manager

# Wait for cert-manager to start...

# Build and install sample-external-issuer and run the E2E tests.
# This step can be run iteratively when ever you make changes to the code or to the installation manifests.
make docker-build kind-load deploy e2e

Continuous Integration

You should configure a CI system to automatically run the unit-tests when the code changes. See the .github/workflows/ directory for some examples of using GitHub Actions which are triggered by changes to pull request branches and by any changes to the master branch.

The E2E tests can be executed with GitHub Actions too. The GitHub Actions Ubuntu runner has Docker installed and is capable of running a Kind cluster for the E2E tests. The Kind cluster logs can be saved in the event of an E2E test failure, and uploaded as a GitHub Actions artifact, to make it easier to diagnose E2E test failures.

Security considerations

We use a Distroless Docker Image as our Docker base image, and we configure our manager process to run as USER: nonroot:nonroot. This limits the privileges of the manager process in the cluster.

The kube-rbac-proxy sidecar Docker image also uses a non-root user by default (since v0.7.0).

Additionally we Configure a Security Context for the manager Pod. We set runAsNonRoot, which ensure that the Kubelet will validate the image at runtime to ensure that it does not run as UID 0 (root) and fail to start the container if it does.

Notes for cert-manager Maintainers

Release Process

Visit the GitHub New Release Page and fill in the form. Here are some example values:

  • Tag Version: v0.1.0-alpha.0, v0.1.0 for example.
  • Target: main
  • Release Title: Release v0.1.0-alpha.2
  • Description: (optional) a short summery of the changes since the last release.

Click the Publish release button to trigger the automated release process:

  • A Docker image will be generated and published to ghcr.io/cert-manager/sample-external-issuer/controller with the chosen tag.
  • An install.yaml file will be generated and attached to the release.

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sample-external-issuer's Issues

Create Kubernetes Events logging significant operations and errors

We should create Kubernetes Events linked to the Sample Issuer and ClusterIssuer resources,
and events linked to the CertificateRequests that the issuer operates on.

This will make it easier for an administrator to understand what the issuer is doing and it will make errors even easier to diagnose, because the warning events will show up in kubectl describe issuer and kubectl describe certificaterequest.

Question: figuring this out as I go, could use a little guidence on this step: add 'kubebuilder CRD Markers'

I have a very short bash and powershell script which I currently use to generate certificates in my kubernetes cluster, they are so small and simple that it seems like if I can just get the sample issuer customized I should be able to add what little code is needed to create a working issuer for my environment which I could then share and support for the community.

Could I get just a little more detail on this step? I see the comment it is specifying '// +kubebuilder:subresource:status' is already in the file its asking me to modify. Is that what I need to add? Has it already been added automatically and the documentation just needs to be updated? Do I need to add in multiple places? Just looking for a little guidence. Please don't just give me a link to https://book.kubebuilder.io/reference/markers/crd.html, I saw the link and have clicked on it, thank you ahead of time. Maybe the answer is I need to go off and learn go for a couple months. If so I let me know and I can move on till I have time. Was hoping I might be able to learn just enough to get things going for now.

api/v1alpha1/{cluster}issuer_types.go: Add Kubebuilder CRD Markers to allow modification of IssuerStatus as a Status Subresource: 
// +kubebuilder:subresource:status

Question: enable Server-Side Apply (SSA)

Hello,
we developed a custom issuer from the sample in this repository.

While testing our custom issuer, we encountered a bug which causes spurious reconcile loops in the RetryOnConflict function we use.
For some reason we still don't understand, the certificaterequest annotations changes are not always applied and the following Reconcile loop does not see them, causing a new API request to our backend.
This is a problem, since API requests must only be performed once per certificaterequest.

We posted the issue on the cert-manager issue tracker and we have been advised to enable Server-Side Apply.

Can it be enabled by changing a setting in the operator configuration (kubebuilder or client-go)?
In any case, could you please provide an example?

Thanks!

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