CMInject is a Python framework that can be used to define and run particle trajectory simulations for sample injection. It can run 1D, 2D, and 3D simulations based on the ODE describing Newton's equation of motion, given that all parts in a simulation setup allow this dimensionality.
It is meant to be used by different groups of people and match different needs, and so it is meant to be both:
- a library that provides a generic way to define and run whole simulation setups, and
- a collection of standard setups for immediate use.
The minimum required Python version to use it is 3.6.
CMInject is free software, see the licensing conditions for details.
This section contains a short quickstart-style installation guide. For detailed installation instructions and more, please have a look at the User Guide of the official documentation.
On some systems, in particular for Python version 3.6, it may be necessary to install the HDF5 libraries before attempting to install CMInject.
Installation of CMInject proceeds through standard Python procedures, i.e., in the code directory run
python setup.py install
A user (non-admin) installation can be performed through
python setup.py install --user
If you plan on developing CMInject you should use
python setup.py develop [--user]
The documentation is available on readthedocs. It can also be generated from this repository by running
python setup.py build_sphinx
The generated HTML documentation can then be viewed by opening ./build/sphinx/html/index.html in a
browser.
Tests are located in the tests/ subdirectory. They can be executed via the command pytest. You may
need to install pytest first, as it is not an explicit dependency of CMInject:
pip install pytestYou should then be able to just run pytest from your console. Make sure you are in the top-level
directory of the CMInject code folder when executing pytest, so that pytest can find the test
files.
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