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dungeness's Introduction

Evaluation of strategies for reducing humpback whale entanglements in the California Dungeness crab fishery

This is the GitHub repository for the following paper:

Please contact Chris Free ([email protected]) with any questions.

Respository structure

The repository is organized using the following architecture:

  • data:
    • raw: the raw data used in the analysis
    • processed: cleaned data used in the analysis
    • ... scripts for cleaning and exporting the raw data
  • code: scripts for conducting the analysis and building tables and figures
    • figures: scripts in this folder will recreate the figures in the paper
    • run_model: scripts in this folder will run the MSE and process the results
    • figures_presentations: can be ignored by the public; this is for internal use only
    • old_effort_dyanmics: can be ignored by the public; this is old work
  • output: model outpus
    • set1-set5: can be ignored by the public; they are from old versions of the model
    • set6: these are the final results used for the published manuscript
  • tables: tables with analysis results
  • figures: figures with analysis results
  • references: key references related to project

Citation

Please cite the paper and model as:

  • Free CM, Bellquist LF, Forney KA, Humberstone J, Kauer K, Lee Q, Liu OR, Samhouri JF, Wilson JR, Bradley D (2023) Static management presents a simple solution to a dynamic fishery and conservation challenge. Biological Conservation 285: 110249.

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