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sqlite-feedstock's Introduction

About sqlite-split-feedstock

Feedstock license: BSD-3-Clause

Home: http://www.sqlite.org/

Package license: Unlicense

Summary: Implements a self-contained, zero-configuration, SQL database engine

Development: https://github.com/mackyle/sqlite

Documentation: http://www.sqlite.org/docs.html

SQLite is a self-contained, high-reliability, embedded, full-featured, public-domain, SQL database engine.It is the most used database engine in the world.

Current build status

Travis linux
Azure
VariantStatus
linux_64 variant
linux_aarch64 variant
linux_ppc64le variant
osx_64 variant
osx_arm64 variant
win_64 variant

Current release info

Name Downloads Version Platforms
Conda Recipe Conda Downloads Conda Version Conda Platforms
Conda Recipe Conda Downloads Conda Version Conda Platforms

Installing sqlite-split

Installing sqlite-split from the conda-forge channel can be achieved by adding conda-forge to your channels with:

conda config --add channels conda-forge
conda config --set channel_priority strict

Once the conda-forge channel has been enabled, libsqlite, sqlite can be installed with conda:

conda install libsqlite sqlite

or with mamba:

mamba install libsqlite sqlite

It is possible to list all of the versions of libsqlite available on your platform with conda:

conda search libsqlite --channel conda-forge

or with mamba:

mamba search libsqlite --channel conda-forge

Alternatively, mamba repoquery may provide more information:

# Search all versions available on your platform:
mamba repoquery search libsqlite --channel conda-forge

# List packages depending on `libsqlite`:
mamba repoquery whoneeds libsqlite --channel conda-forge

# List dependencies of `libsqlite`:
mamba repoquery depends libsqlite --channel conda-forge

About conda-forge

Powered by NumFOCUS

conda-forge is a community-led conda channel of installable packages. In order to provide high-quality builds, the process has been automated into the conda-forge GitHub organization. The conda-forge organization contains one repository for each of the installable packages. Such a repository is known as a feedstock.

A feedstock is made up of a conda recipe (the instructions on what and how to build the package) and the necessary configurations for automatic building using freely available continuous integration services. Thanks to the awesome service provided by Azure, GitHub, CircleCI, AppVeyor, Drone, and TravisCI it is possible to build and upload installable packages to the conda-forge anaconda.org channel for Linux, Windows and OSX respectively.

To manage the continuous integration and simplify feedstock maintenance conda-smithy has been developed. Using the conda-forge.yml within this repository, it is possible to re-render all of this feedstock's supporting files (e.g. the CI configuration files) with conda smithy rerender.

For more information please check the conda-forge documentation.

Terminology

feedstock - the conda recipe (raw material), supporting scripts and CI configuration.

conda-smithy - the tool which helps orchestrate the feedstock. Its primary use is in the construction of the CI .yml files and simplify the management of many feedstocks.

conda-forge - the place where the feedstock and smithy live and work to produce the finished article (built conda distributions)

Updating sqlite-split-feedstock

If you would like to improve the sqlite-split recipe or build a new package version, please fork this repository and submit a PR. Upon submission, your changes will be run on the appropriate platforms to give the reviewer an opportunity to confirm that the changes result in a successful build. Once merged, the recipe will be re-built and uploaded automatically to the conda-forge channel, whereupon the built conda packages will be available for everybody to install and use from the conda-forge channel. Note that all branches in the conda-forge/sqlite-split-feedstock are immediately built and any created packages are uploaded, so PRs should be based on branches in forks and branches in the main repository should only be used to build distinct package versions.

In order to produce a uniquely identifiable distribution:

  • If the version of a package is not being increased, please add or increase the build/number.
  • If the version of a package is being increased, please remember to return the build/number back to 0.

Feedstock Maintainers

sqlite-feedstock's People

Contributors

bollwyvl avatar ceholden avatar chambbj avatar conda-forge-admin avatar conda-forge-curator[bot] avatar ekomarova avatar flaviomartins avatar github-actions[bot] avatar hmaarrfk avatar isuruf avatar jakakokosar avatar jakirkham avatar jjhelmus avatar lexual avatar mariusvniekerk avatar msarahan avatar ocefpaf avatar regro-cf-autotick-bot avatar rouault avatar sangramga avatar snorfalorpagus avatar stuertz avatar sylvaincorlay avatar xhochy avatar xylar avatar

Stargazers

avatar avatar

Watchers

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Forkers

conda-forge-admin msarahan ocefpaf jerowe lexual mingwandroid johanfforsberg anacondarecipes jakirkham-feedstocks snorfalorpagus regro-cf-autotick-bot chambbj archiconda osgeo-forge sangramga jakakokosar bollwyvl xhochy selten ramonaoptics xylar matuskosut leej3 jjhelmus tschoonj snowman2 sylvaincorlay stuertz conda-forge-linter srnetochan ekomarova rouault e8035669acarmv7 finnagin timsnyder hmaarrfk

sqlite-feedstock's Issues

ImportError: libsqlite3.so.0: cannot open shared object file: No such file or directory

Solution to issue cannot be found in the documentation.

  • I checked the documentation.

Issue

I am using pysqlite3==0.4.6 in a conda environment.

I have the issue that some code coverage python tool does not find the lib in a conda environment:

$ coverage erase
Traceback (most recent call last):
  File "/opt/conda/bin/coverage", line 5, in <module>
    from coverage.cmdline import main
  File "/opt/conda/lib/python3.11/site-packages/coverage/__init__.py", line [24](https://gitlab.res.sys.shared.fortis/AAIW/light-industrialisation/postgres_backup_job/-/jobs/2033987#L24), in <module>
    from coverage.control import (
  File "/opt/conda/lib/python3.11/site-packages/coverage/control.py", line 29, in <module>
    from coverage.collector import Collector, HAS_CTRACER
  File "/opt/conda/lib/python3.11/site-packages/coverage/collector.py", line 20, in <module>
    from coverage.data import CoverageData
  File "/opt/conda/lib/python3.11/site-packages/coverage/data.py", line [25](https://gitlab.res.sys.shared.fortis/AAIW/light-industrialisation/postgres_backup_job/-/jobs/2033987#L25), in <module>
    from coverage.sqldata import CoverageData
  File "/opt/conda/lib/python3.11/site-packages/coverage/sqldata.py", line 16, in <module>
    import sqlite3
  File "/opt/conda/lib/python3.11/sqlite3/__init__.py", line 57, in <module>
    from sqlite3.dbapi2 import *
  File "/opt/conda/lib/python3.11/sqlite3/dbapi2.py", line [27](https://gitlab.res.sys.shared.fortis/AAIW/light-industrialisation/postgres_backup_job/-/jobs/2033987#L27), in <module>
    from _sqlite3 import *
ImportError: libsqlite3.so.0: cannot open shared object file: No such file or directory

If I change the LD_LIBRARY_PATH to this it works:

ENV LD_LIBRARY_PATH="/opt/conda/pkgs/libsqlite-3.45.2-h2797004_0/lib/:$LD_LIBRARY_PATH"

It's a bit ugly because I would have expected that by changing the LD_LIBRARY_PATH to ""/opt/conda/lib" it would work, but no.

A symlink fix would solve the issue maybe?

Installed packages

(base) mambauser@8d9384dc7d5b:/tmp$ micromamba list
List of packages in environment: "/opt/conda"

  Name              Version       Build               Channel           
──────────────────────────────────────────────────────────────────────────
  _libgcc_mutex     0.1           conda_forge         conda-forge       
  _openmp_mutex     4.5           2_gnu               conda-forge       
  bzip2             1.0.8         h7b6447c_0          anaconda-pkgs-main
  ca-certificates   2023.08.22    h06a4308_0          anaconda-pkgs-main
  expat             2.5.0         h6a678d5_0          anaconda-pkgs-main
  icu               73.2          h59595ed_0          conda-forge       
  keyutils          1.6.1         h166bdaf_0          conda-forge       
  krb5              1.21.3        h659f571_0          conda-forge       
  ld_impl_linux-64  2.38          h1181459_1          anaconda-pkgs-main
  libedit           3.1.20191231  he28a2e2_2          conda-forge       
  libffi            3.4.4         h6a678d5_0          anaconda-pkgs-main
  libgcc-ng         14.1.0        h77fa898_0          conda-forge       
  libgomp           14.1.0        h77fa898_0          conda-forge       
  libiconv          1.17          hd590300_2          conda-forge       
  libnsl            2.0.1         hd590300_0          conda-forge       
  libpq             16.3          ha72fbe1_0          conda-forge       
  libsqlite         3.45.2        h2797004_0          conda-forge       
  libstdcxx-ng      14.1.0        hc0a3c3a_0          conda-forge       
  libuuid           2.38.1        h0b41bf4_0          conda-forge       
  libxml2           2.12.7        hc051c1a_1          conda-forge       
  libzlib           1.3.1         h4ab18f5_1          conda-forge       
  ncurses           6.4           h6a678d5_0          anaconda-pkgs-main
  openssl           3.3.1         h4ab18f5_1          conda-forge       
  pip               24.0          pyhd8ed1ab_0        conda-forge       
  postgresql        16.3          h8e811e2_0          conda-forge       
  pysqlite3         0.4.6         pyh911a504_0        conda-forge       
  python            3.11.0        he550d4f_1_cpython  conda-forge       
  readline          8.2           h5eee18b_0          anaconda-pkgs-main
  setuptools        70.1.1        pyhd8ed1ab_0        conda-forge       
  sqlite            3.45.2        h2c6b66d_0          conda-forge       
  tk                8.6.13        noxft_h4845f30_101  conda-forge       
  tzcode            2024a         h3f72095_0          conda-forge       
  tzdata            2023c         h04d1e81_0          anaconda-pkgs-main
  wheel             0.37.1        pyhd3eb1b0_0        anaconda-pkgs-main
  xz                5.4.2         h5eee18b_0          anaconda-pkgs-main
  zlib              1.3.1         h4ab18f5_1          conda-forge

Environment info

(base) mambauser@8d9384dc7d5b:/tmp$ micromamba info

                                           __
          __  ______ ___  ____ _____ ___  / /_  ____ _
         / / / / __ `__ \/ __ `/ __ `__ \/ __ \/ __ `/
        / /_/ / / / / / / /_/ / / / / / / /_/ / /_/ /
       / .___/_/ /_/ /_/\__,_/_/ /_/ /_/_.___/\__,_/
      /_/


            environment : base (active)
           env location : /opt/conda
      user config files : /home/mambauser/.mambarc
 populated config files : /opt/conda/.condarc
                          /opt/conda/.condarc
       libmamba version : 1.4.3
     micromamba version : 1.4.3
           curl version : libcurl/7.88.1 OpenSSL/3.1.0 zlib/1.2.13 zstd/1.5.2 libssh2/1.10.0 nghttp2/1.52.0
     libarchive version : libarchive 3.6.2 zlib/1.2.13 bz2lib/1.0.8 libzstd/1.5.2
       virtual packages : __unix=0=0
                          __linux=3.10.0=0
                          __glibc=2.31=0
                          __archspec=1=x86_64
               channels : https://mycompany.com/artifactory/api/conda/anaconda-pkgs-main/linux-64
                          https://mycompany.com/artifactory/api/conda/anaconda-pkgs-main/noarch
                          https://mycompany.com/artifactory/api/conda/conda-forge/linux-64
                          https://mycompany.com/artifactory/api/conda/conda-forge/noarch
       base environment : /opt/conda
               platform : linux-64

C functions missing from the library under Windows w.s.t. Linux (moved to Anaconda sqlite-feedstock)

Hello,

Lots of functions are missing from the created library under Windows, which causes (may cause) dependent packages to break under Windows.
(E.g. QT. See the issue I encountered there.)

Actually my issue was that the SQLITE_ENABLE_COLUMN_METADATA macro was needed for the sqlite3_column_table_name16(..) function to be included, however that macro is not set to 1 and not passed to the compiler under Windows.

On Linux the build.sh passes a banch of such SQLITE_ENABLE... macros:

export CPPFLAGS="${CPPFLAGS} -DSQLITE_ENABLE_COLUMN_METADATA=1 \
                             -DSQLITE_ENABLE_UNLOCK_NOTIFY \
                             -DSQLITE_ENABLE_DBSTAT_VTAB=1 \
                             -DSQLITE_ENABLE_FTS3_TOKENIZER=1 \
                             -DSQLITE_SECURE_DELETE \
                             -DSQLITE_MAX_VARIABLE_NUMBER=250000 \
                             -DSQLITE_MAX_EXPR_DEPTH=10000"

However bld.bat completely misses them:

:: build the dll
cl sqlite3.c -link -dll -out:sqlite3.dll

I suggest to keep them in sync, and fix bld.bat to pass these macros, too.

Performance difference on windows compared to sqlite.exe from sqlite.org

Comment:

I noticed a significant performance difference when running a script using the conda windows build compared to the binaries available on sqlite.org.

The last statement in the script below takes about double the time: 31 seconds compared to 18 seconds.

Could there be a difference in the compilation parameters that explains this difference?

-- Create table for bboxes
CREATE TABLE bboxes (
  id INTEGER PRIMARY KEY AUTOINCREMENT NOT NULL,
  minx FLOAT,
  maxx FLOAT,
  miny FLOAT,
  maxy FLOAT
);

-- Fill the table with 1 million bboxes
INSERT INTO bboxes(minx, maxx, miny, maxy)
  WITH RECURSIVE
    cnt(x) AS (
       SELECT 0
       UNION ALL
       SELECT x+10 FROM cnt
        LIMIT 1000
    )
  SELECT minx, maxx, miny, maxy 
    FROM (SELECT x AS minx, x+10 AS maxx FROM cnt) x,
         (SELECT x AS miny, x+10 AS maxy FROM cnt) y;

-- Create and fill up rtree.
-- Takes +- 31 secs using conda sqlite.exe, +- 18 secs with version downloaded from sqlite.org
CREATE VIRTUAL TABLE bboxes_rtree USING rtree(id, minx, maxx, miny, maxy);
INSERT INTO bboxes_rtree
  SELECT id, minx, maxx, miny, maxy FROM bboxes;

Reference to OSGeo/gdal#7614

Incorrectly publishing 3.19.3 as 3.20.1

The url was not updated here. As a result, it appears we are still using 3.19.3, but calling it 3.20.1. We need to fix this to get the correct sqlite version and use it.

xref: #21

sqlite 3.46 package broken?

Solution to issue cannot be found in the documentation.

  • I checked the documentation.

Issue

From today when running update --all in a cond env either with mamba or conda I am having errors both on windows and linux with executing Ipython and JupyterLab with issues with sqlite3

On linux is a.so error
On Windows an import DLL load failed


$ ipython
Traceback (most recent call last):
  File "/data/conda/envs/python312/bin/ipython", line 6, in <module>
    from IPython import start_ipython
  File "/data/conda/envs/python312/lib/python3.12/site-packages/IPython/__init__.py", line 55, in <module>
    from .terminal.embed import embed
  File "/data/conda/envs/python312/lib/python3.12/site-packages/IPython/terminal/embed.py", line 15, in <module>
    from IPython.core.interactiveshell import DummyMod, InteractiveShell
  File "/data/conda/envs/python312/lib/python3.12/site-packages/IPython/core/interactiveshell.py", line 110, in <module>
    from IPython.core.history import HistoryManager
  File "/data/conda/envs/python312/lib/python3.12/site-packages/IPython/core/history.py", line 10, in <module>
    import sqlite3
  File "/data/conda/envs/python312/lib/python3.12/sqlite3/__init__.py", line 57, in <module>
    from sqlite3.dbapi2 import *
  File "/data/conda/envs/python312/lib/python3.12/sqlite3/dbapi2.py", line 27, in <module>
    from _sqlite3 import *
ImportError: /data/conda/envs/python312/lib/python3.12/lib-dynload/_sqlite3.cpython-312-x86_64-linux-gnu.so: undefined symbol: sqlite3_deserialize

$ conda install sqlite=3.45
Channels:
 - defaults
 - conda-forge
 - pytorch
 - nvidia
Platform: linux-64
Collecting package metadata (repodata.json): done
Solving environment: done

## Package Plan ##

  environment location: /data/conda/envs/python312

  added / updated specs:
    - sqlite=3.45


The following packages will be SUPERSEDED by a higher-priority channel:

  sqlite              conda-forge::sqlite-3.46.0-h6d4b2fc_0 --> pkgs/main::sqlite-3.45.3-h5eee18b_0


Proceed ([y]/n)?


Downloading and Extracting Packages:

Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(python312) [r107333@z0euw1lptmx515 deploy]$ ipython
Python 3.12.3 | packaged by conda-forge | (main, Apr 15 2024, 18:38:13) [GCC 12.3.0]
Type 'copyright', 'credits' or 'license' for more information
IPython 8.26.0 -- An enhanced Interactive Python. Type '?' for help.

In [1]: exit

Installed packages

_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                  2_kmp_llvm    conda-forge
absl-py                   2.1.0           py312h06a4308_0
aiohttp                   3.9.5           py312h5eee18b_0
aiosignal                 1.3.1              pyhd8ed1ab_0    conda-forge
annotated-types           0.7.0              pyhd8ed1ab_0    conda-forge
anyio                     4.4.0              pyhd8ed1ab_0    conda-forge
argon2-cffi               23.1.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py312h5eee18b_0
asttokens                 2.4.1              pyhd8ed1ab_0    conda-forge
async-lru                 2.0.4           py312h06a4308_0
async-timeout             4.0.3           py312h06a4308_0
attrs                     23.2.0             pyh71513ae_0    conda-forge
babel                     2.14.0             pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.12.3          py312h06a4308_0
blas                      2.122                  openblas    conda-forge
blas-devel                3.9.0           22_linux64_openblas    conda-forge
bleach                    6.1.0              pyhd8ed1ab_0    conda-forge
blinker                   1.8.2              pyhd8ed1ab_0    conda-forge
bottleneck                1.4.0           py312h085067d_1    conda-forge
brotli                    1.1.0                hd590300_1    conda-forge
brotli-bin                1.1.0                hd590300_1    conda-forge
brotli-python             1.1.0           py312h30efb56_1    conda-forge
bzip2                     1.0.8                h5eee18b_6
c-ares                    1.32.0               h4ab18f5_0    conda-forge
ca-certificates           2024.7.4             hbcca054_0    conda-forge
cached-property           1.5.2                      py_0
cached_property           1.5.2              pyha770c72_1    conda-forge
cachetools                5.3.3           py312h06a4308_0
certifi                   2024.7.4        py312h06a4308_0
cffi                      1.16.0          py312h5eee18b_1
charset-normalizer        3.3.2              pyhd8ed1ab_0    conda-forge
click                     8.1.7           py312h06a4308_0
cloudpickle               3.0.0              pyhd8ed1ab_0    conda-forge
comm                      0.2.2              pyhd8ed1ab_0    conda-forge
contourpy                 1.2.1           py312h8572e83_0    conda-forge
cpprb                     11.0.0                   pypi_0    pypi
cuda-cudart               12.5.82              he02047a_0    conda-forge
cuda-cudart_linux-64      12.5.82              h85509e4_0    conda-forge
cuda-nvrtc                12.5.82              he02047a_0    conda-forge
cuda-nvtx                 12.5.82              he02047a_0    conda-forge
cuda-version              12.5                 hd4f0392_3    conda-forge
cudnn                     8.9.7.29             h092f7fd_3    conda-forge
cycler                    0.12.1             pyhd8ed1ab_0    conda-forge
dataclasses               0.8                pyh6d0b6a4_7
debugpy                   1.8.2           py312h7070661_0    conda-forge
decorator                 5.1.1              pyhd3eb1b0_0
defusedxml                0.7.1              pyhd3eb1b0_0
deprecated                1.2.14             pyh1a96a4e_0    conda-forge
distributedrl             0.1                       dev_0    <develop>
entrypoints               0.4             py312h06a4308_0
etils                     1.9.2              pyhd8ed1ab_0    conda-forge
exceptiongroup            1.2.0           py312h06a4308_0
executing                 2.0.1              pyhd8ed1ab_0    conda-forge
expat                     2.6.2                h6a678d5_0
factoria                  1.0                       dev_0    <develop>
farama-notifications      0.0.4           py312h06a4308_0
filelock                  3.15.4             pyhd8ed1ab_0    conda-forge
flask                     3.0.3           py312h06a4308_0
fonttools                 4.53.1          py312h41a817b_0    conda-forge
freetype                  2.12.1               h4a9f257_0
frozenlist                1.4.1           py312h98912ed_0    conda-forge
fsspec                    2024.6.1           pyhff2d567_0    conda-forge
glfw                      3.4                  hd590300_0    conda-forge
gmp                       6.3.0                hac33072_2    conda-forge
gmpy2                     2.1.5           py312h1d5cde6_1    conda-forge
google-api-core           2.19.1                   pypi_0    pypi
google-auth               2.32.0                   pypi_0    pypi
google-cloud-core         2.4.1                    pypi_0    pypi
google-cloud-storage      2.17.0                   pypi_0    pypi
google-crc32c             1.5.0           py312h5eee18b_0
google-resumable-media    2.7.1                    pypi_0    pypi
googleapis-common-protos  1.63.2             pyhd8ed1ab_0    conda-forge
grpcio                    1.62.2          py312hb06c811_0    conda-forge
gymnasium                 0.29.1          py312h8da182e_1    conda-forge
h11                       0.14.0          py312h06a4308_0
h2                        4.1.0              pyhd8ed1ab_0    conda-forge
h5py                      3.11.0          py312h34c39bb_0
hdf5                      1.12.1               h2b7332f_3
hpack                     4.0.0                      py_0
httpcore                  1.0.5              pyhd8ed1ab_0    conda-forge
httpx                     0.27.0             pyhd8ed1ab_0    conda-forge
hyperframe                6.0.1              pyhd3eb1b0_0
icu                       73.2                 h59595ed_0    conda-forge
idna                      3.7             py312h06a4308_0
imageio                   2.34.2             pyh12aca89_0    conda-forge
importlib-metadata        8.0.0              pyha770c72_0    conda-forge
importlib_metadata        8.0.0                hd8ed1ab_0    conda-forge
importlib_resources       6.4.0           py312h06a4308_0
ipykernel                 6.29.5             pyh3099207_0    conda-forge
ipython                   8.26.0             pyh707e725_0    conda-forge
ipywidgets                8.1.3              pyhd8ed1ab_0    conda-forge
itsdangerous              2.2.0           py312h06a4308_0
jax-jumpy                 1.0.0           py312h06a4308_0
jedi                      0.19.1             pyhd8ed1ab_0    conda-forge
jinja2                    3.1.4           py312h06a4308_0
joblib                    1.4.2           py312h06a4308_0
json5                     0.9.25             pyhd8ed1ab_0    conda-forge
jsonschema                4.23.0             pyhd8ed1ab_0    conda-forge
jsonschema-specifications 2023.12.1          pyhd8ed1ab_0    conda-forge
jupyter-lsp               2.2.5              pyhd8ed1ab_0    conda-forge
jupyter_client            8.6.2              pyhd8ed1ab_0    conda-forge
jupyter_core              5.7.2           py312h06a4308_0
jupyter_events            0.10.0          py312h06a4308_0
jupyter_server            2.14.1          py312h06a4308_0
jupyter_server_terminals  0.5.3              pyhd8ed1ab_0    conda-forge
jupyterlab                4.2.3              pyhd8ed1ab_0    conda-forge
jupyterlab_code_formatter 2.2.1           py312h06a4308_0
jupyterlab_pygments       0.3.0              pyhd8ed1ab_1    conda-forge
jupyterlab_server         2.27.2             pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        3.0.11             pyhd8ed1ab_0    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
kiwisolver                1.4.5           py312h8572e83_1    conda-forge
krb5                      1.21.3               h659f571_0    conda-forge
lcms2                     2.16                 hb7c19ff_0    conda-forge
ld_impl_linux-64          2.40                 hf3520f5_7    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libabseil                 20240116.2      cxx17_h6a678d5_0
libaec                    1.1.3                h59595ed_0    conda-forge
libblas                   3.9.0           22_linux64_openblas    conda-forge
libbrotlicommon           1.1.0                hd590300_1    conda-forge
libbrotlidec              1.1.0                hd590300_1    conda-forge
libbrotlienc              1.1.0                hd590300_1    conda-forge
libcblas                  3.9.0           22_linux64_openblas    conda-forge
libccd-double             2.1                  h59595ed_3    conda-forge
libcrc32c                 1.1.2                h6a678d5_0
libcublas                 12.5.3.2             he02047a_0    conda-forge
libcufft                  11.2.3.61            he02047a_0    conda-forge
libcurand                 10.3.6.82            he02047a_0    conda-forge
libcurl                   8.8.0                hca28451_1    conda-forge
libcusolver               11.6.3.83            he02047a_0    conda-forge
libcusparse               12.5.1.3             he02047a_0    conda-forge
libdeflate                1.20                 hd590300_0    conda-forge
libedit                   3.1.20230828         h5eee18b_0
libev                     4.33                 h7f8727e_1
libexpat                  2.6.2                h59595ed_0    conda-forge
libffi                    3.4.4                h6a678d5_1
libgcc-ng                 14.1.0               h77fa898_0    conda-forge
libgfortran-ng            14.1.0               h69a702a_0    conda-forge
libgfortran5              14.1.0               hc5f4f2c_0    conda-forge
libgomp                   14.1.0               h77fa898_0    conda-forge
libgrpc                   1.62.2               h15f2491_0    conda-forge
libhwloc                  2.11.1          default_hecaa2ac_1000    conda-forge
libjpeg-turbo             3.0.3                h5eee18b_0
liblapack                 3.9.0           22_linux64_openblas    conda-forge
liblapacke                3.9.0           22_linux64_openblas    conda-forge
libmagma                  2.7.2                h173bb3b_2    conda-forge
libmagma_sparse           2.7.2                h173bb3b_3    conda-forge
libmujoco                 3.1.6                h754e0f8_0    conda-forge
libnghttp2                1.58.0               h47da74e_1    conda-forge
libnsl                    2.0.1                hd590300_0    conda-forge
libnvjitlink              12.5.82              he02047a_0    conda-forge
libopenblas               0.3.27          pthreads_hac2b453_1    conda-forge
libpng                    1.6.43               h2797004_0    conda-forge
libprotobuf               4.25.3               he621ea3_0
libre2-11                 2023.09.01           h5a48ba9_2    conda-forge
libsodium                 1.0.18               h7b6447c_0
libsqlite                 3.46.0               hde9e2c9_0    conda-forge
libssh2                   1.11.0               h251f7ec_0
libstdcxx-ng              14.1.0               hc0a3c3a_0    conda-forge
libtiff                   4.6.0                h1dd3fc0_3    conda-forge
libtorch                  2.3.0           cuda120_h2b0da52_301    conda-forge
libuuid                   2.38.1               h0b41bf4_0    conda-forge
libuv                     1.48.0               hd590300_0    conda-forge
libwebp-base              1.4.0                hd590300_0    conda-forge
libxcb                    1.15                 h7f8727e_0
libxcrypt                 4.4.36               hd590300_1    conda-forge
libxkbcommon              1.7.0                h662e7e4_0    conda-forge
libxml2                   2.13.1               hfdd30dd_0
libzlib                   1.2.13               h4ab18f5_6    conda-forge
llvm-openmp               18.1.7               ha31de31_0    conda-forge
lodepng                   20220109             h924138e_0    conda-forge
markdown                  3.6                pyhd8ed1ab_0    conda-forge
markdown-it-py            2.2.0           py312h06a4308_1
markupsafe                2.1.5           py312h98912ed_0    conda-forge
matplotlib-base           3.9.1           py312h9201f00_0    conda-forge
matplotlib-inline         0.1.7              pyhd8ed1ab_0    conda-forge
mdurl                     0.1.2                    pypi_0    pypi
minari                    0.4.3                    pypi_0    pypi
mistune                   3.0.2              pyhd8ed1ab_0    conda-forge
mkl                       2023.2.0         h84fe81f_50496    conda-forge
mkl-service               2.4.1           py312h4daa2fd_0    conda-forge
mkl_fft                   1.3.10          py312h8a8eec4_1    conda-forge
mkl_random                1.2.6           py312h233cd48_1    conda-forge
mpc                       1.3.1                hfe3b2da_0    conda-forge
mpfr                      4.2.1                h9458935_1    conda-forge
mpmath                    1.3.0           py312h06a4308_0
mujoco                    3.1.6                ha770c72_0    conda-forge
mujoco-python             3.1.6           py312h8fc6881_0    conda-forge
mujoco-samples            3.1.6                hac33072_0    conda-forge
mujoco-simulate           3.1.6                hac33072_0    conda-forge
multidict                 6.0.5           py312h98912ed_0    conda-forge
munkres                   1.1.4                      py_0
nbclient                  0.10.0             pyhd8ed1ab_0    conda-forge
nbconvert                 7.16.4               hd8ed1ab_1    conda-forge
nbconvert-core            7.16.4             pyhd8ed1ab_1    conda-forge
nbconvert-pandoc          7.16.4               hd8ed1ab_1    conda-forge
nbformat                  5.10.4             pyhd8ed1ab_0    conda-forge
nccl                      2.22.3.1             hbc370b7_0    conda-forge
ncurses                   6.5                  h59595ed_0    conda-forge
nest-asyncio              1.6.0           py312h06a4308_0
networkx                  3.3             py312h06a4308_0
nomkl                     3.0                           0
notebook-shim             0.2.4              pyhd8ed1ab_0    conda-forge
numexpr                   2.10.0          py312hf412c99_100    conda-forge
numpy                     1.26.4          py312h2809609_0
numpy-base                1.26.4          py312he1a6c75_0
openblas                  0.3.27          pthreads_h9eca1d5_1    conda-forge
openjpeg                  2.5.2                h488ebb8_0    conda-forge
openssl                   3.3.1                h4ab18f5_1    conda-forge
overrides                 7.7.0              pyhd8ed1ab_0    conda-forge
packaging                 24.1            py312h06a4308_0
pandas                    2.2.2           py312h526ad5a_0
pandoc                    3.2.1                ha770c72_0    conda-forge
pandocfilters             1.5.0              pyhd3eb1b0_0
parso                     0.8.4              pyhd8ed1ab_0    conda-forge
patsy                     0.5.6           py312h06a4308_0
pexpect                   4.9.0              pyhd8ed1ab_0    conda-forge
pickleshare               0.7.5           pyhd3eb1b0_1003
pillow                    10.3.0          py312hdcec9eb_0    conda-forge
pip                       24.0            py312h06a4308_0
pkgutil-resolve-name      1.3.10          py312h06a4308_1
platformdirs              4.2.2              pyhd8ed1ab_0    conda-forge
polcanet                  1.0.0                     dev_0    <develop>
portion                   2.4.2              pyhd8ed1ab_0    conda-forge
prometheus_client         0.20.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.47             pyha770c72_0    conda-forge
prompt_toolkit            3.0.47               hd8ed1ab_0    conda-forge
proto-plus                1.24.0                   pypi_0    pypi
protobuf                  5.27.2                   pypi_0    pypi
psutil                    6.0.0           py312h9a8786e_0    conda-forge
ptyprocess                0.7.0              pyhd3eb1b0_2
pure_eval                 0.2.2              pyhd3eb1b0_0
pyasn1                    0.6.0                    pypi_0    pypi
pyasn1-modules            0.4.0              pyhd8ed1ab_0    conda-forge
pybind11-abi              4                    hd3eb1b0_1
pycparser                 2.22               pyhd8ed1ab_0    conda-forge
pydantic                  2.8.2              pyhd8ed1ab_0    conda-forge
pydantic-core             2.20.1          py312hf008fa9_0    conda-forge
pyglfw                    2.7.0           py312h7900ff3_0    conda-forge
pygments                  2.18.0             pyhd8ed1ab_0    conda-forge
pyopengl                  3.1.6              pyhd8ed1ab_1    conda-forge
pyparsing                 3.1.2              pyhd8ed1ab_0    conda-forge
pyrtpi                    1.0                       dev_0    <develop>
pysocks                   1.7.1           py312h06a4308_0
pythae                    0.1.2              pyhd8ed1ab_1    conda-forge
python                    3.12.3          hab00c5b_0_cpython    conda-forge
python-dateutil           2.9.0post0      py312h06a4308_2
python-fastjsonschema     2.20.0             pyhd8ed1ab_0    conda-forge
python-json-logger        2.0.7           py312h06a4308_0
python-tzdata             2024.1             pyhd8ed1ab_0    conda-forge
python_abi                3.12                    4_cp312    conda-forge
pytorch                   2.3.0           cuda120_py312h26b3cf7_301    conda-forge
pytorch-gpu               2.3.0           cuda120py312hf72234c_301    conda-forge
pytz                      2024.1          py312h06a4308_0
pyyaml                    6.0.1           py312h5eee18b_0
pyzmq                     26.0.3          py312h8fd38d8_0    conda-forge
qhull                     2020.2               hdb19cb5_2
re2                       2023.09.01           h7f4b329_2    conda-forge
readline                  8.2                  h5eee18b_0
redis-py                  5.0.7              pyhd8ed1ab_0    conda-forge
redis-server              7.2.5                he19d79f_0    conda-forge
referencing               0.35.1             pyhd8ed1ab_0    conda-forge
requests                  2.32.3             pyhd8ed1ab_0    conda-forge
rfc3339-validator         0.1.4           py312h06a4308_0
rfc3986-validator         0.1.1           py312h06a4308_0
rich                      13.7.1          py312h06a4308_0
rpds-py                   0.19.0          py312hf008fa9_0    conda-forge
rsa                       4.9                      pypi_0    pypi
scikit-learn              1.5.1           py312h775a589_0    conda-forge
scipy                     1.14.0          py312hc2bc53b_1    conda-forge
seaborn                   0.13.2          py312h06a4308_0
seaborn-base              0.13.2             pyhd8ed1ab_0    conda-forge
send2trash                1.8.3              pyh0d859eb_0    conda-forge
setuptools                70.2.0             pyhd8ed1ab_0    conda-forge
shellingham               1.5.4                    pypi_0    pypi
six                       1.16.0             pyhd3eb1b0_1
sleef                     3.5.1                h9b69904_2    conda-forge
sniffio                   1.3.1              pyhd8ed1ab_0    conda-forge
sortedcontainers          2.4.0              pyhd3eb1b0_0
soupsieve                 2.5             py312h06a4308_0
sqlite                    3.45.3               h5eee18b_0
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
statsmodels               0.14.2          py312ha883a20_0
sympy                     1.12.1          pypyh2585a3b_103    conda-forge
tabulate                  0.9.0           py312h06a4308_0
tbb                       2021.8.0             hdb19cb5_0
tensorboard               2.17.0             pyhd8ed1ab_0    conda-forge
tensorboard-data-server   0.7.0           py312h52d8a92_0
tensorboardx              2.6.2.2            pyhd8ed1ab_0    conda-forge
terminado                 0.18.1             pyh0d859eb_0    conda-forge
threadpoolctl             3.5.0           py312he106c6f_0
tinycss2                  1.3.0              pyhd8ed1ab_0    conda-forge
tinyxml2                  10.0.0               h59595ed_0    conda-forge
tk                        8.6.14               h39e8969_0
tomli                     2.0.1           py312h06a4308_1
torchvision               0.18.1          cuda120py312hb04d961_1    conda-forge
tornado                   6.4.1           py312h5eee18b_0
tqdm                      4.66.4          py312he106c6f_0
traitlets                 5.14.3          py312h06a4308_0
typer                     0.12.3                   pypi_0    pypi
typing-extensions         4.12.2               hd8ed1ab_0    conda-forge
typing_extensions         4.12.2             pyha770c72_0    conda-forge
typing_utils              0.1.0              pyhd8ed1ab_0    conda-forge
tzdata                    2024a                h04d1e81_0
unicodedata2              15.1.0          py312h5eee18b_0
urllib3                   2.2.2           py312h06a4308_0
wayland                   1.23.0               h5291e77_0    conda-forge
wcwidth                   0.2.13             pyhd8ed1ab_0    conda-forge
webencodings              0.5.1           py312h06a4308_2
websocket-client          1.8.0           py312h06a4308_0
werkzeug                  3.0.3           py312h06a4308_0
wheel                     0.43.0          py312h06a4308_0
widgetsnbextension        4.0.11             pyhd8ed1ab_0    conda-forge
wrapt                     1.16.0          py312h98912ed_0    conda-forge
xkeyboard-config          2.42                 h4ab18f5_0    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libx11               1.8.9                h8ee46fc_0    conda-forge
xorg-libxau               1.0.11               hd590300_0    conda-forge
xorg-libxext              1.3.4                h0b41bf4_2    conda-forge
xorg-libxinerama          1.1.5                h27087fc_0    conda-forge
xorg-xextproto            7.3.0             h0b41bf4_1003    conda-forge
xorg-xproto               7.0.31            h27cfd23_1007
xz                        5.4.6                h5eee18b_1
yaml                      0.2.5                h7b6447c_0
yarl                      1.9.4           py312h98912ed_0    conda-forge
zeromq                    4.3.5                h6a678d5_0
zipp                      3.19.2             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               h4ab18f5_6    conda-forge
zstandard                 0.22.0          py312h5b18bf6_1    conda-forge
zstd                      1.5.6                ha6fb4c9_0    conda-forge

Environment info

active environment : python312
    active env location : /data/conda/envs/python312
            shell level : 2
       user config file : /home/x/.condarc
 populated config files : /data/conda/.condarc
                          /home/x/.condarc
          conda version : 24.5.0
    conda-build version : not installed
         python version : 3.12.3.final.0
                 solver : libmamba (default)
       virtual packages : __archspec=1=zen2
                          __conda=24.5.0=0
                          __cuda=12.2=0
                          __glibc=2.28=0
                          __linux=4.18.0=0
                          __unix=0=0
       base environment : /data/conda  (writable)
      conda av data dir : /data/conda/etc/conda
  conda av metadata url : None
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://conda.anaconda.org/pytorch/linux-64
                          https://conda.anaconda.org/pytorch/noarch
                          https://conda.anaconda.org/nvidia/linux-64
                          https://conda.anaconda.org/nvidia/noarch
          package cache : /data/conda/pkgs
                          /home/x/.conda/pkgs
       envs directories : /data/conda/envs
                          /home/x/.conda/envs
               platform : linux-64
             user-agent : conda/24.5.0 requests/2.32.3 CPython/3.12.3 Linux/4.18.0-513.18.1.el8_9.x86_64 rhel/8.9 glibc/2.28 solver/libmamba conda-libmamba-solver/24.1.0 libmambapy/1.5.8
                UID:GID : 42016:42999
             netrc file : None
           offline mode : False

Linking to system libedit on macOS

This package is linking to macOS's system copy of libedit instead of our copy of readline as can be seen in this log. The issue was introduced in PR ( #19 ), which attempted to take over the work in PR ( #7 ). Either we should fix sqlite to link to our readline on macOS or we should drop readline support for sqlite at least on macOS.

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