d3b-center Goto Github PK
Name: D3b
Type: Organization
Bio: Center for Data Driven Discovery in Biomedicine at the Children's Hospital of Philadelphia
Location: Philadelphia, PA
Blog: d3b.center
Name: D3b
Type: Organization
Bio: Center for Data Driven Discovery in Biomedicine at the Children's Hospital of Philadelphia
Location: Philadelphia, PA
Blog: d3b.center
Routine QC job for data hosted on Flywheel
routine QC job for data hosted on Flywheel
Warehousing from flywheel
๐ญTransform and export data from a relational database to a PFB (Portable Format for Bioinformatics) Avro file
Open Targets Tumor-only + PDX processing pipelines. Mostly a port over of the pipelines from https://cgc.sbgenomics.com/public/apps/q?search=pdx
In collaboration with the Diskin lab, this repo houses a workflow designed to take in KF annotated vcf files, and further annotate for pathogenicity prediction
Central repository to organize publication-related code
Template Python Repo for D3B Projects
โ REDCap API interface in Python
๐ Tool to generate GitHub-based software releases with semantic versioning tags
Configuration for AWS Transfer Family SFTP transfer server
Repo to generate combined TPM matrices of various RNA-seq datasets
Collection of reusable python utilities
๐ญ D3b Warehouse Pipeline for REDCap
CWL Implementation based on this tool http://compbio.med.harvard.edu/BIC-seq/ and this cluster implementation : https://github.com/ding-lab/BICSEQ2
Immune profiling for PBTA Medullo samples
pipeline to process diseaseXpress datasets
Rest API for disease express
shinyapp for diseaseXpress
A base Docker image for Terraform.
Utility to simplify running applications in docker containers
FusionAnnotator source code
Flywheel gear for CaPTk-BraTSPipeline command
Flywheel gear for CaPTk Preprocessing coregistration tool
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.