Comments (1)
Thanks, I'll make this change in the next release of HISAT2.
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Related Issues (20)
- (ERR): ValueError: invalid literal for int() with base 10: '.' HOT 1
- Hisat2 does not align almost exact reads with snptran index
- forks not cleaned up when `-x` passed file that does not exist
- libc++abi: terminating in hisat-3n-table HOT 5
- Bam output?
- hisat2 command error
- Genome Indexing - Encountered internal HISAT2 exception (#1) HOT 2
- `hisat-3n-table` can not parse base quality correctly HOT 1
- directional-mapping mode is not consistent is flag and YZ tag.
- Issue with aligning with hisat2
- Any plans for supporting mac arm architecture?
- (ERR): hisat2-align died with signal 6 (ABRT) (core dumped) HOT 3
- Could not locate a HISAT2 index HOT 2
- Forcing alignment only to the forward reference for HISAT-3N HOT 1
- *** Error in `hisat2-build': double free or corruption (!prev): 0x00002b5724374370 *** HOT 1
- mapped read length
- Question regarding the runtime for hisat-3n-table
- hisat2-build DOES NOT work for me! HOT 1
- building standard hisat-3n indices with --base-change but not --repeat-index HOT 4
- "Local Graph Exploded" warning for hisat2 build using --snp,--haplotype,--exon and --ss.
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