Simple tool to attempt automation of gateway cloning primer design
##Required modules
The following perl modules are required by this script:
Bio::Perl
Bio::SeqIO
Bio::DB::GenBank
These can be installed via cpan - see http://www.cpan.org/modules/INSTALL.html
In addition, perl version 5.10.0 or higher is required (run perl -v to see what version you have installed).
##Install and Run
Get the script:
git clone https://github.com/gantzgraf/gatewayPrimerDesigner.git
Enter the newly downloaded directory:
cd gatewayPrimerDesigner
Run the script to get usage information:
perl gateway_designer.pl -h
##Credit
Copyright © 2015 David A. Parry
Code for calculating primer TMs is lifted from perlprimer.pl (Copyright © 2003-2011, Owen Marshall)
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.