Comments (1)
Thanks for pointing this out!
from orthofinder.
Related Issues (20)
- Orthologic Subfamily identification
- Orthogroups.txt and Orthogroups.csv files do not match HOT 1
- Broken link to tutorials in README
- From Orthogroups to a core Proteome
- Pan Plot as Roary
- An error is reported when running orthofinder for more than 15 species
- Running with GLIBC 2.17
- Orthofinder not writing gene to HOG even though it matches all others in the group
- -M msa -T raxml fails in OrthoFinder 2.5.5
- ERROR: .fas appears to contain nucleotide sequences instead of amino acid sequences. Use '-d' option
- diamond dropped --ignore-warnings flag, leads to error HOT 5
- To run STAG/STRIDE without requiring all species present in tree/ output with only species present in all trees HOT 1
- paralogs in same species
- different sets of genes as input
- Installing on Mac M1 - README update
- Issue with user supplied species tree
- conda install failes HOT 1
- [Bug:] Option `-p tmp_pickle_dir` not working
- [Feature request] reduce number generated files per directory (e.g. for blast results, pickle files)
- ERROR when starting from BLAST, Orthogroups or Tree
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from orthofinder.