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DICOM Archive J2EE application

Java 60.52% XSLT 5.15% CSS 0.16% Awk 0.05% HTML 3.76% JavaScript 4.83% TypeScript 23.31% PLSQL 0.02% SCSS 2.19% Shell 0.01%

dcm4chee-arc-light's Introduction

dcm4che DICOM Toolkit & Library

Sources: https://github.com/dcm4che/dcm4che
Binaries: https://sourceforge.net/projects/dcm4che/files/dcm4che3
Issue Tracker: https://github.com/dcm4che/dcm4che/issues
Build Status:

This is a complete rewrite of dcm4che-2.x.

One main focus was to minimize the memory footprint of the DICOM data sets. It already provides modules to store/fetch configuration data to/from LDAP, compliant to the DICOM Application Configuration Management Profile, specified in DICOM PS 3.15, Annex H.

dcm4che uses a native library for the compression and decompression of images. Here is the list of supported systems and architectures:

System	Architecture	Package	Requirement
Linux	x86 64-bit	linux-x86-64	GLIBC_2.17
Linux	ARM 64-bit	linux-aarch64	GLIBC_2.27
Linux	ARM 32-bit	linux-armv7a	GLIBC_2.28
Windows	x86 64-bit	windows-x86-64	Windows 7 or higher
Windows	x86 32-bit	windows-x86	Windows 7 or higher
Mac OS	x86 64-bit	macosx-x86-64	Mac OS 10.13 or higher
Mac OS	ARM 64-bit	macosx-aarch64	Mac OS 11 or higher

Build

Make sure you have Java 17 (JDK) or newer installed.

Run the Maven Wrapper script for building:

./mvnw install

or on Windows:

.\mvnw install

Modules

dcm4che-audit
dcm4che-audit-keycloak
dcm4che-conf
- dcm4che-conf-api
- dcm4che-conf-api-hl7
- dcm4che-conf-json
- dcm4che-conf-json-schema
- dcm4che-conf-ldap
- dcm4che-conf-ldap-audit
- dcm4che-conf-ldap-hl7
- dcm4che-conf-ldap-imageio
- dcm4che-conf-ldap-schema
dcm4che-core
dcm4che-dcmr
dcm4che-deident
dcm4che-dict
dcm4che-dict-priv
dcm4che-emf
dcm4che-hl7
dcm4che-image
dcm4che-imageio
dcm4che-imageio-opencv
dcm4che-imageio-rle
dcm4che-js-dict
dcm4che-json
dcm4che-mime
dcm4che-net
dcm4che-net-audit
dcm4che-net-hl7
dcm4che-net-imageio
dcm4che-soundex
dcm4che-ws-rs
dcm4che-xdsi
dcm4che-jboss-modules

Utilities

agfa2dcm: Extract DICOM files from Agfa BLOB file
agfa2sr: Extract concatenated XML Agfa Reports and convert them to DICOM SR Documents
dcm2dcm: Transcode DICOM file according the specified Transfer Syntax
dcm2jpg: Convert DICOM image to JPEG or other image formats
dcm2json: Convert DICOM file in JSON presentation
dcm2pdf: Extract encapsulated PDF, CDA or STL from DICOM file
dcm2str: Apply Attributes Format Pattern to dicom file or command line parameters.
dcm2xml: Convert DICOM file in XML presentation
dcmbenchmark: Parse a DICOM file repetitively, measuring time and used memory
dcmdir: Dump, create or update DICOMDIR file
dcmdump: Dump DICOM file in textual form
dcmldap: Insert/remove configuration entries for Network AEs into/from LDAP server
dcmqrscp: Simple DICOM archive
dcmvalidate: Validate DICOM object according a specified Information Object Definition
deidentify: De-identify one or several DICOM files
emf2sf: Convert DICOM Enhanced Multi-frame image to legacy DICOM Single-frame images
findscu: Invoke DICOM C-FIND Query Request
fixlo2un: Fixes length of private tags truncated to 2 bytes on conversion from implicit VR to explicit VR Transfer Syntax
getscu: Invoke DICOM C-GET Retrieve Request
hl72xml: Convert HL7 v2.x message in XML presentation
hl7pdq: Query HL7 v2.x Patient Demographics Supplier
hl7pix: Query HL7 v2.x PIX Manager
hl7rcv: HL7 v2.x Receiver
hl7snd: Send HL7 v2.x message
ianscp: DICOM Instance Availability Notification receiver
ianscu: Send DICOM Instance Availability Notification
jpg2dcm: Convert JPEG images or MPEG videos in DICOM files
json2dcm: Converts JSON file to DICOM file
json2index: Creates search index for UI configuration from JSON schema files
json2props: Convert Archive configuration schema JSON files to key/value properties files and vice versa
json2rst: Generate ReStructuredText files from Archive configuration schema JSON files
maskpxdata: Mask information burned into the Pixel Data
mkkos: Make DICOM Key Object Selection Document
modality: Simulates DICOM Modality
movescu: Invoke DICOM C-MOVE Retrieve request
mppsscp: DICOM Modality Performed Procedure Step Receiver
mppsscu: Send DICOM Modality Performed Procedure Step
pdf2dcm: Convert PDF file into DICOM file
planarconfig: Detects the actual planar configuration of uncompressed pixel data of color images with Photometric Interpretation RGB or YBR_FULL and optionally correct non matching values of attribute Planar Configuration of the image
qstar: QStar SOAP Client to prefetch/retrieve or fetch file information of specified files
stgcmtscu: Invoke DICOM Storage Commitment Request
storescp: DICOM Composite Object Receiver
storescu: Send DICOM Composite Objects
stowrs: Send DICOM Composite Objects or Bulkdata file over Web
stowrsd: STOW-RS Server
swappxdata: Swaps bytes of uncompressed pixel data in DICOM files
syslog: Send Syslog messages via TCP/TLS or UDP to a Syslog Receiver
syslogd: Receives RFC 5424 Syslog messages via TCP/TLS or UDP
tpl2xml: Converts private dictionaries present in template file(s) to xml file(s).
upsscu: Invokes services of Unified Procedure Step Service Class
wadors: Wado RS Client Simulator
wadows: Wado WS Client Simulator
xml2dcm: Create/Update DICOM file from/with XML presentation
xml2hl7: Create HL7 v2.x message from XML presentation
xroad: XRoad SOAP Client to query Estonia National Patient Registry for Patient Demographics

License

Mozilla Public License Version 1.1

dcm4chee-arc-light's People

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zssure-thu diego0020 151706061 mol8 jzhongsun adildalli ming-hai dsimic dalechao alfiyazi opendicom top501 mbaena pedroinformatico zhiaazz hieverybodyworld edwarddu xydoublez wangxueqzz scupperscupper nachepri john-dali raushankj 8agoxu evrimulgen mythsya madhuy25 nuphox llnjzy delphisky rinfan otus-solutions harshkumar1 zhengsw vconsult huangxu1985 ztnozdormu pyjava1984 meacial liyg02 zuky2017 rsnonstop luomii dhanzhang image-et dustbuster jacklau88 yuewei1987 fabstechtz luutqf siczxw023 palmendras carolineaubert hknclk wanghailin91 jayzhk ipadawan yongliangzhang qk21126215 manjunathgovindaraju igraemvtanki alforo esrefdurna ralphdelara actuallyrc jeanclaude2 marlonramon fabricehx joselimadev aloux00 mytsckan tony32769 thienphuc92 sriharshaangadi linluzhang refun007 bachmanna marinamota18 hmbradiologia romeokaka telelaudo arnold-maderthaner 1739603040 swcomeon takashi0401 yinpeng-cn fengyunworkstation mklassen dzyking thundi3 cjarero felicitytoji raydl007 volcanion0607 go2hero shuyutech andor-pierdelacabeza mohsenh dtornieri hmunozblue

dcm4chee-arc-light's Issues

Support to flag Storage Systems as read-only

Support to flag Storage Systems as read-only to prevent the DeletionService on a node with read only access to try do purge files from it.

Scheduler may stop running caused by RuntimeException thrown by run()

Ensure, no Exception is thrown by run()

Storage fails if there are multiple records for the Patient ID in the DB

2016-01-06 04:28:20,247 ERROR [org.jboss.as.ejb3.invocation] (EE-ManagedExecutorService-default-Thread-3) WFLYEJB0034: EJB Invocation failed on component PatientServiceEJB for method public abstract org.dcm4chee.arc.entity.Patient org.dcm4chee.arc.patient.PatientService.findPatient(org.dcm4che3.data.Attributes,boolean) throws org.dcm4chee.arc.patient.NonUniquePatientException,org.dcm4chee.arc.patient.PatientMergedException,org.dcm4chee.arc.patient.CircularPatientMergeException: javax.ejb.EJBTransactionRolledbackException: Multiple Patients with ID SCSGERM
    at org.jboss.as.ejb3.tx.CMTTxInterceptor.handleInCallerTx(CMTTxInterceptor.java:159)
    at org.jboss.as.ejb3.tx.CMTTxInterceptor.invokeInCallerTx(CMTTxInterceptor.java:256)
    at org.jboss.as.ejb3.tx.CMTTxInterceptor.required(CMTTxInterceptor.java:329)
    at org.jboss.as.ejb3.tx.CMTTxInterceptor.processInvocation(CMTTxInterceptor.java:239)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.CurrentInvocationContextInterceptor.processInvocation(CurrentInvocationContextInterceptor.java:41)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.invocationmetrics.WaitTimeInterceptor.processInvocation(WaitTimeInterceptor.java:43)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.security.SecurityContextInterceptor.processInvocation(SecurityContextInterceptor.java:100)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.ShutDownInterceptorFactory$1.processInvocation(ShutDownInterceptorFactory.java:64)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.LoggingInterceptor.processInvocation(LoggingInterceptor.java:66)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ee.component.NamespaceContextInterceptor.processInvocation(NamespaceContextInterceptor.java:50)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.AdditionalSetupInterceptor.processInvocation(AdditionalSetupInterceptor.java:54)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.ContextClassLoaderInterceptor.processInvocation(ContextClassLoaderInterceptor.java:64)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.InterceptorContext.run(InterceptorContext.java:356)
    at org.wildfly.security.manager.WildFlySecurityManager.doChecked(WildFlySecurityManager.java:634)
    at org.jboss.invocation.AccessCheckingInterceptor.processInvocation(AccessCheckingInterceptor.java:61)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.InterceptorContext.run(InterceptorContext.java:356)
    at org.jboss.invocation.PrivilegedWithCombinerInterceptor.processInvocation(PrivilegedWithCombinerInterceptor.java:80)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.ChainedInterceptor.processInvocation(ChainedInterceptor.java:61)
    at org.jboss.as.ee.component.ViewService$View.invoke(ViewService.java:195)
    at org.jboss.as.ee.component.ViewDescription$1.processInvocation(ViewDescription.java:185)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.ChainedInterceptor.processInvocation(ChainedInterceptor.java:61)
    at org.jboss.as.ee.component.ProxyInvocationHandler.invoke(ProxyInvocationHandler.java:73)
    at org.dcm4chee.arc.patient.PatientService$$$view15.findPatient(Unknown Source)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.jboss.weld.util.reflection.Reflections.invokeAndUnwrap(Reflections.java:434)
    at org.jboss.weld.bean.proxy.EnterpriseBeanProxyMethodHandler.invoke(EnterpriseBeanProxyMethodHandler.java:127)
    at org.jboss.weld.bean.proxy.EnterpriseTargetBeanInstance.invoke(EnterpriseTargetBeanInstance.java:56)
    at org.jboss.weld.bean.proxy.InjectionPointPropagatingEnterpriseTargetBeanInstance.invoke(InjectionPointPropagatingEnterpriseTargetBeanInstance.java:67)
    at org.jboss.weld.bean.proxy.ProxyMethodHandler.invoke(ProxyMethodHandler.java:100)
    at org.dcm4chee.arc.patient.impl.PatientService$251853255$Proxy$_$$_Weld$EnterpriseProxy$.findPatient(Unknown Source)
    at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceEJB.findPatient(StoreServiceEJB.java:339)
    at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceEJB.createInstance(StoreServiceEJB.java:326)
    at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceEJB.updateDB(StoreServiceEJB.java:167)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.jboss.as.ee.component.ManagedReferenceMethodInterceptor.processInvocation(ManagedReferenceMethodInterceptor.java:52)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.InterceptorContext$Invocation.proceed(InterceptorContext.java:437)
    at org.jboss.as.weld.ejb.Jsr299BindingsInterceptor.doMethodInterception(Jsr299BindingsInterceptor.java:82)
    at org.jboss.as.weld.ejb.Jsr299BindingsInterceptor.processInvocation(Jsr299BindingsInterceptor.java:93)
    at org.jboss.as.ee.component.interceptors.UserInterceptorFactory$1.processInvocation(UserInterceptorFactory.java:63)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.invocationmetrics.ExecutionTimeInterceptor.processInvocation(ExecutionTimeInterceptor.java:43)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.jpa.interceptor.SBInvocationInterceptor.processInvocation(SBInvocationInterceptor.java:47)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.InterceptorContext$Invocation.proceed(InterceptorContext.java:437)
    at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73)
    at org.jboss.as.weld.ejb.EjbRequestScopeActivationInterceptor.processInvocation(EjbRequestScopeActivationInterceptor.java:83)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ee.concurrent.ConcurrentContextInterceptor.processInvocation(ConcurrentContextInterceptor.java:45)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.InitialInterceptor.processInvocation(InitialInterceptor.java:21)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.ChainedInterceptor.processInvocation(ChainedInterceptor.java:61)
    at org.jboss.as.ee.component.interceptors.ComponentDispatcherInterceptor.processInvocation(ComponentDispatcherInterceptor.java:52)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.NonPooledEJBComponentInstanceAssociatingInterceptor.processInvocation(NonPooledEJBComponentInstanceAssociatingInterceptor.java:59)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.tx.CMTTxInterceptor.invokeInOurTx(CMTTxInterceptor.java:275)
    at org.jboss.as.ejb3.tx.CMTTxInterceptor.required(CMTTxInterceptor.java:327)
    at org.jboss.as.ejb3.tx.CMTTxInterceptor.processInvocation(CMTTxInterceptor.java:239)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.CurrentInvocationContextInterceptor.processInvocation(CurrentInvocationContextInterceptor.java:41)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.invocationmetrics.WaitTimeInterceptor.processInvocation(WaitTimeInterceptor.java:43)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.security.SecurityContextInterceptor.processInvocation(SecurityContextInterceptor.java:100)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.ShutDownInterceptorFactory$1.processInvocation(ShutDownInterceptorFactory.java:64)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.LoggingInterceptor.processInvocation(LoggingInterceptor.java:66)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ee.component.NamespaceContextInterceptor.processInvocation(NamespaceContextInterceptor.java:50)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.as.ejb3.component.interceptors.AdditionalSetupInterceptor.processInvocation(AdditionalSetupInterceptor.java:54)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.ContextClassLoaderInterceptor.processInvocation(ContextClassLoaderInterceptor.java:64)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.InterceptorContext.run(InterceptorContext.java:356)
    at org.wildfly.security.manager.WildFlySecurityManager.doChecked(WildFlySecurityManager.java:634)
    at org.jboss.invocation.AccessCheckingInterceptor.processInvocation(AccessCheckingInterceptor.java:61)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.InterceptorContext.run(InterceptorContext.java:356)
    at org.jboss.invocation.PrivilegedWithCombinerInterceptor.processInvocation(PrivilegedWithCombinerInterceptor.java:80)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.ChainedInterceptor.processInvocation(ChainedInterceptor.java:61)
    at org.jboss.as.ee.component.ViewService$View.invoke(ViewService.java:195)
    at org.jboss.as.ee.component.ViewDescription$1.processInvocation(ViewDescription.java:185)
    at org.jboss.invocation.InterceptorContext.proceed(InterceptorContext.java:340)
    at org.jboss.invocation.ChainedInterceptor.processInvocation(ChainedInterceptor.java:61)
    at org.jboss.as.ee.component.ProxyInvocationHandler.invoke(ProxyInvocationHandler.java:73)
    at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceEJB$$$view14.updateDB(Unknown Source)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.jboss.weld.util.reflection.Reflections.invokeAndUnwrap(Reflections.java:434)
    at org.jboss.weld.bean.proxy.EnterpriseBeanProxyMethodHandler.invoke(EnterpriseBeanProxyMethodHandler.java:127)
    at org.jboss.weld.bean.proxy.EnterpriseTargetBeanInstance.invoke(EnterpriseTargetBeanInstance.java:56)
    at org.jboss.weld.bean.proxy.InjectionPointPropagatingEnterpriseTargetBeanInstance.invoke(InjectionPointPropagatingEnterpriseTargetBeanInstance.java:67)
    at org.jboss.weld.bean.proxy.ProxyMethodHandler.invoke(ProxyMethodHandler.java:100)
    at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceEJB$Proxy$_$$_Weld$EnterpriseProxy$.updateDB(Unknown Source)
    at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceImpl.store(StoreServiceImpl.java:85)
    at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceImpl$Proxy$_$$_WeldClientProxy.store(Unknown Source)
    at org.dcm4chee.arc.store.scp.CStoreSCP.store(CStoreSCP.java:36)
    at org.dcm4che3.net.service.BasicCStoreSCP.onDimseRQ(BasicCStoreSCP.java:72)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.jboss.weld.bean.proxy.AbstractBeanInstance.invoke(AbstractBeanInstance.java:38)
    at org.jboss.weld.bean.proxy.ProxyMethodHandler.invoke(ProxyMethodHandler.java:100)
    at org.jboss.weld.proxies.DicomService$160215610$Proxy$_$$_WeldClientProxy.onDimseRQ(Unknown Source)
    at org.dcm4che3.net.service.DicomServiceRegistry.onDimseRQ(DicomServiceRegistry.java:86)
    at org.dcm4che3.net.ApplicationEntity.onDimseRQ(ApplicationEntity.java:399)
    at org.dcm4che3.net.Association.onDimseRQ(Association.java:649)
    at org.dcm4che3.net.PDUDecoder.decodeDIMSE(PDUDecoder.java:459)
    at org.dcm4che3.net.Association.handlePDataTF(Association.java:633)
    at org.dcm4che3.net.State$4.onPDataTF(State.java:103)
    at org.dcm4che3.net.Association.onPDataTF(Association.java:629)
    at org.dcm4che3.net.PDUDecoder.nextPDU(PDUDecoder.java:177)
    at org.dcm4che3.net.Association$2.run(Association.java:479)
    at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at org.glassfish.enterprise.concurrent.internal.ManagedFutureTask.run(ManagedFutureTask.java:141)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)
    at org.glassfish.enterprise.concurrent.ManagedThreadFactoryImpl$ManagedThread.run(ManagedThreadFactoryImpl.java:250)
Caused by: org.dcm4chee.arc.patient.NonUniquePatientException: Multiple Patients with ID SCSGERM
    at org.dcm4chee.arc.patient.impl.PatientServiceEJB.findPatient(PatientServiceEJB.java:103)

Provide RESTful Service to access configuration in LDAP

Service Path: dcm4chee-arc/devices/{deviceName}

Sometimes Export queue entries stay on SCHEDULDED without beeing served

Retry to retrieve objects from fallback CMOVE SCP

Add network connection on device fails if Protocol not equal to DICOM

Storage of Objects without Patient ID fails

Change default configuration to enable outgoing connections to remote DICOM peers

The default configuration specifies "localhost" as host name for archive connections. If no client bind address is specified, the archive uses the host name also as client bind address for outgoing connections, which results that the archive can only open connections to local DICOM peers.

To enable to initiate TCP connections to remote hosts without having to configure the actual host name of the archive, the client bind address shall be explicitly specified as 0.0.0.0in the default configuration.

Support forwarding of C-MOVE RQs, if the requested Entities are not accessable at the local node

Location of files for C-GET

I am using the GetSCU class to get the dicom objects from DICOM server,i am getting status 0H.but i am unable to find the location where exactly file(Dicom object) is stored.

Where will the configuration for strorage location for C-GET service,

I can see the configuration for Storage (C-STORE) in default-config.ldif(dcmURI: file:///var/local/dcm4chee-arc/fs1)

Provide RESTful Service to reject Instances

rejectStudy:
aets/{AETitle}/rs/studies/{StudyUID}/reject/{CodeValue}^{CodingSchemeDesignator}

rejectSeries:
aets/{AETitle}/rs/studies/{StudyUID}/series/{SeriesUID}/reject/{CodeValue}^{CodingSchemeDesignator}

rejectInstance:
aets/{AETitle}/rs/studies/{StudyUID}/series/{SeriesUID}/instances/{ObjectUID}/reject/{CodeValue}^{CodingSchemeDesignator}

queryRejectionCodes:
reject
Response:

[
  {
    "codeValue": "REVOKE_REJECTION",
    "codingSchemeDesignator": "99DCM4CHEE",
    "codeMeaning": "Restore rejected Instances"
  },
  {
    "codeValue": "113001",
    "codingSchemeDesignator": "DCM",
    "codeMeaning": "Rejected for Quality Reasons"
  },
  {
    "codeValue": "113039",
    "codingSchemeDesignator": "DCM",
    "codeMeaning": "Data Retention Policy Expired"
  },
  {
    "codeValue": "113037",
    "codingSchemeDesignator": "DCM",
    "codeMeaning": "Rejected for Patient Safety Reasons"
  },
  {
    "codeValue": "113038",
    "codingSchemeDesignator": "DCM",
    "codeMeaning": "Incorrect Modality Worklist Entry"
  }
]

Concurrent receive of first object of Study over multiple Association fails caused by org.hibernate.exception.ConstraintViolationException

Missing Query Retrieve Level (0008,0052) in pending C-FIND RSP

Enable to reject Studies, Series and Instances using the UI

Add Maven profiles to build secured version of UI and RESTful services

Maven Profiles:

secure: Includes

<security-constraint>
  <web-resource-collection>
    <web-resource-name>DICOM</web-resource-name>
    <url-pattern>/*</url-pattern>
  </web-resource-collection>
  <auth-constraint>
    <role-name>user</role-name>
  </auth-constraint>
</security-constraint>
<login-config>
  <auth-method>KEYCLOAK</auth-method>
  <realm-name>dcm4che</realm-name>
</login-config>
<security-role>
  <role-name>user</role-name>
</security-role>

in web.xml of UI (dcm4chee-arc-ui-VERSION-secure.war) and RESTful services (dcm4chee-arc-war-VERSION-secure.war) and pack it in EAR: dcm4chee-arc-ear-VERSION-secure.ear

secure-ui: Only add <security-constraint> in web.xml of UI (dcm4chee-arc-ui-VERSION-secure.war), but not in RESTful services (dcm4chee-arc-war-VERSION-unsecure.war) and pack it in EAR: dcm4chee-arc-ear-VERSION-secure-ui.ear
unsecure: No <security-constraint> in web.xml of UI (dcm4chee-arc-ui-VERSION-unsecure.war) and RESTful services (dcm4chee-arc-war-VERSION-unsecure.war). Created EAR: dcm4chee-arc-ear-VERSION.ear. Activated by default.

Support forwarding of C-MOVE-RQs if the requested Entities are not managed by the archive

Configurable by properties:

ArchiveDeviceExtension.fallbackCMoveSCP
ArchiveAEExtension.fallbackCMoveSCP

Auto reconnect to LDAP Server

Auto reconnect to LDAP Server, so avoid need of Archive redeployment after LDAP restart

Assert equals rectified for Objects using Arraylist & Added LDAP Merge for ArchiveAttributeCoercion object

Support ExportRules dependend on Receiving (=Called) AET

QIDO-RS limit does not work properly with rejected instances

Currently Studies (or Series) which only contains rejected instances are not returned by the QIDO-RS service, but no additional study will be returned to match the specified limit count.

The simplest solution is to return also records for Studies (or Series) without non-rejected instances.

Enable to check failed mount of Storage File Systems

Enable to configure additional AE Title(s) of Network AE

Enable to configure additional AE Title(s) of Network AE, to accept Association RQs also with such Called AE Title

Add Logout Tab in UI

Trigger export of entities by the UI using Export RESTful service

Provide stripped-down default configuration (LDIF file: default-config.ldif)

IHE-ITI-20: Record Audit Event

Event	Audit Message
Archive Start/Stop	Application Activity
Instances Stored	DICOM Instances Transferred
Rejection Note Stored	DICOM Instances Accessed
Retrieve Instances	DICOM Instances Transferred
WADO Retrieve	DICOM Instances Transferred
Export Instances	Begin Transferring DICOM Instances
Study Deleted	DICOM Study Deleted
Query Instances	Query
QIDO Query	Query
TLS Node-Authentication failure	Security Alert

Export fails on multiple archive instances sharing one DB

Export Task scheduled on one node may be tried to be executed on another node, which causes a NPE, because there is no Exporter configured on the other node with the Exported ID of the scheduled Export Task.

IHE-ITI-20: Record Audit Event, continue

Event	Audit Message
User authentication	User Authentication

Deletion of Studies from Storage if the usable space falls below a configurable threshold

DDL Scripts for Oracle broken

IHE Transaction RAD-66: Rejection Note Stored

Support IHE Transaction RAD-66: Rejection Note Stored, as specified in IHE Radiology (RAD) Technical Framework Volume 3.

Audit Message are not sent if audit spool directory does not exists

e.g.:

11:13:45,328 WARN  [org.dcm4chee.arc.audit.AuditService] (default task-22) Failed to write to Audit Spool File - {} : java.nio.file.NoSuchFileException: /home/gunter/wildfly-9.0.2.Final/standalone/data/audit-spool/QUERY_QIDO1717509521485769829.tmp
    at sun.nio.fs.UnixException.translateToIOException(UnixException.java:86)
    at sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:102)
    at sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:107)
    at sun.nio.fs.UnixFileSystemProvider.newByteChannel(UnixFileSystemProvider.java:214)
    at java.nio.file.Files.newByteChannel(Files.java:317)
    at java.nio.file.Files.createFile(Files.java:588)
    at java.nio.file.TempFileHelper.create(TempFileHelper.java:138)
    at java.nio.file.TempFileHelper.createTempFile(TempFileHelper.java:161)
    at java.nio.file.Files.createTempFile(Files.java:805)
    at org.dcm4chee.arc.audit.AuditService.spoolQuery(AuditService.java:406)

Increase the Number of Message Consumers for JMS Queue Export1 from 1 to 5

Fix NPE in Transcoder on parsing Data Fragments before the Pixel Data attribute

1:C-STORE-RQ[pcid=3, prior=0
  orig=WFM1TLN >> 257:C-MOVE-RQ
  cuid=1.2.840.10008.5.1.4.1.1.2 - CT Image Storage
  iuid=1.2.840.113619.2.327.3.279736847.404.1423800678.586.1 - ?
  tsuid=1.2.840.10008.1.2.4.70 - JPEG Lossless, Non-Hierarchical, First-Order Prediction (Process 14 [Selection Value 1]) failed. Caused by:    : org.dcm4che3.net.service.DicomServiceException: java.lang.IllegalArgumentException: Self-suppression not permitted
        at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceImpl.store(StoreServiceImpl.java:91)
        at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceImpl$Proxy$_$$_WeldClientProxy.store(Unknown Source)
        at org.dcm4chee.arc.store.scp.CStoreSCP.store(CStoreSCP.java:36)
        at org.dcm4che3.net.service.BasicCStoreSCP.onDimseRQ(BasicCStoreSCP.java:72)
        at sun.reflect.GeneratedMethodAccessor343.invoke(Unknown Source)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:497)
        at org.jboss.weld.bean.proxy.AbstractBeanInstance.invoke(AbstractBeanInstance.java:38)
        at org.jboss.weld.bean.proxy.ProxyMethodHandler.invoke(ProxyMethodHandler.java:100)
        at org.jboss.weld.proxies.DicomService$1281079750$Proxy$_$$_WeldClientProxy.onDimseRQ(Unknown Source)
        at org.dcm4che3.net.service.DicomServiceRegistry.onDimseRQ(DicomServiceRegistry.java:86)
        at org.dcm4che3.net.ApplicationEntity.onDimseRQ(ApplicationEntity.java:399)
        at org.dcm4che3.net.Association.onDimseRQ(Association.java:649)
        at org.dcm4che3.net.PDUDecoder.decodeDIMSE(PDUDecoder.java:459)
        at org.dcm4che3.net.Association.handlePDataTF(Association.java:633)
        at org.dcm4che3.net.State$4.onPDataTF(State.java:103)
        at org.dcm4che3.net.Association.onPDataTF(Association.java:629)
        at org.dcm4che3.net.PDUDecoder.nextPDU(PDUDecoder.java:177)
        at org.dcm4che3.net.Association$2.run(Association.java:479)
        at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
        at java.util.concurrent.FutureTask.run(FutureTask.java:266)
        at org.glassfish.enterprise.concurrent.internal.ManagedFutureTask.run(ManagedFutureTask.java:141)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)
        at org.glassfish.enterprise.concurrent.ManagedThreadFactoryImpl$ManagedThread.run(ManagedThreadFactoryImpl.java:250)
Caused by: java.lang.IllegalArgumentException: Self-suppression not permitted
        at java.lang.Throwable.addSuppressed(Throwable.java:1043)
        at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceImpl.store(StoreServiceImpl.java:83)
        ... 25 more
Caused by: java.lang.NullPointerException
        at org.dcm4che3.imageio.codec.Transcoder$1.readValue(Transcoder.java:317)
        at org.dcm4che3.io.DicomInputStream.readFragments(DicomInputStream.java:714)
        at org.dcm4che3.io.DicomInputStream.readValue(DicomInputStream.java:558)
        at org.dcm4che3.imageio.codec.Transcoder$1.readValue(Transcoder.java:303)
        at org.dcm4che3.io.DicomInputStream.readAttributes(DicomInputStream.java:537)
        at org.dcm4che3.imageio.codec.Transcoder.transcode(Transcoder.java:284)
        at org.dcm4chee.arc.store.org.dcm4chee.archive.store.impl.StoreServiceImpl.store(StoreServiceImpl.java:83)

Add various Transfer Capabilities to default and sample configuration

Add Transfer Capabilities for Storage SOP Classes:

Legacy Converted Enhanced CT Image Storage
Legacy Converted Enhanced MR Image Storage
Breast Projection X-Ray Image Storage For Presentation
Breast Projection X-Ray Image Storage For Processing
VL Image Storage Trial (Retired)
VLMultiFrame Image Storage Trial (Retired)
Wide Field Ophthalmic Photography Stereographic Projection Image Storage
Wide Field Ophthalmic Photography 3D Coordinates Image Storage
Ophthalmic Thickness Map Storage
Corneal Topography Map Storage
Legacy Converted Enhanced PET Image Storage
Extensible SR Storage
Stored Print Storage SOP Class (Retired)
Hardcopy Grayscale Image Storage SOP Class (Retired)
Hardcopy Color Image Storage SOP Class (Retired)
Parametric Map Storage
Surface Scan Mesh Storage
Surface Scan Point Cloud Storage

Extend Transfer Capabilities of default configuration with Storage SOP Classes added in DICOM 2016a

Add Transfer Capabilities for private SOP Classes into default archive configuration

Archive page becomes blank when double clicked on any of the tabs

IHE-ITI-30: Patient Identity Management - Option Merge

IHE IT Infrastructure Technical Framework, Volume 1, p 142ff
14 Patient Administration Management (PAM)

IHE IT Infrastructure Technical Framework, Volume 2b, p 12ff
3.30 Patient Identity Management

Concurrent receive of first object of Patient over multiple Association creates duplicate Patient Records

Provide RESTful service to verify DICOM Connection

Duplicate Code Entries in DB

Replace

alter table code add constraint unique (code_value, code_designator, code_version);

alter table code add constraint unique (code_value, code_designator);

to prevent duplicate Code Enties with code_version = NULL.

Breaks persistence of Codes which only differs on code_version - will be solved on demand

WADO-RS

Support acting as retrieve cache proxy

Support acting as retrieve cache proxy, by forwarding C-MOVE RQs to a configurable fallback MOVE SCP, if none of the requested objects is available in the archive. But change the Move Destination AET to a configurable AET of the archive. So the fallback Move SCP will send the requested objects to the archive. After all objects are retrieved from the fallback MOVE SCP, the archive will forward the requested objects to the Move Destination specified in the original C-MOVE RQ. If the objects are rquested again by another C-MOVE RQ, they are already available in the archive and need not be retrieved from the fallback MOVE SCP.

storeAccessControlID - accessControlID assigned to studies received by this AE.
If null, no accessControlID will be assigned to studies received by this AE
accessControlIDs - accessControlIDs assigned to query/retrieve requests received by the AE.
If {}, studies with any accessControlID may be queried or retrieved from this AE.
Otherwise only studies which accessControlID match one of these accessControlIDs
and studies without accessControlID may be queried or retrieved from this AE.