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Name: Mark Diekhans
Type: User
Company: UCSC
Location: Santa Cruz, CA, US
Name: Mark Diekhans
Type: User
Company: UCSC
Location: Santa Cruz, CA, US
Analysis of read-through transcripts
RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.
Experiment with repo and GA4GH
FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing
Collect of SO Ontologies
Small general-purpose library for C and Python with an emphasis on bioinformatics.
Small general purpose library for C and Python with focus on bioinformatics.
Main repository for the Sphinx documentation builder
Tool for the Quality Control of Long-Read Defined Transcriptomes
Various tools to work with data from SQUANTI3
Sunclock 3.57 (not written by me; formerly hosted at http://www.arvernes.com/wiki/index.php/Sunclock)
some experimentation
Assembly hub for T2T CHRM13 assemblies
Hub for the T2T Primates Project
T2T Centromere hub
This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files
Find and characterise transposable element insertions
Lightroom plugin that finds duplicates by metadata
Toil is a scalable, efficient, cross-platform pipeline management system, written entirely in Python, and designed around the principles of functional programming.
create, manage, and upload track hubs for use in the UCSC genome browser
Various toos to validate exon frames and CDS in gene annotation (not generally useful)
A fast python class for reading 2-bit files (used by UCSC genome browser)
A BLAT (PSL) to SAM converter.
The MPD website
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.