Comments (1)
Dear @shannjiang,
circTest is designed for setups where the replicate number is constant, so the results will probably be not correct. You may try to remove replicates from the other samples to have all conditions with the same number of replicates.
Cheers,
Tobias
from circtest.
Related Issues (12)
- move CircTest usage from DCC into CircTest HOT 1
- Possible convergence problem HOT 6
- Won't work with DCC input natively
- Warning messages during Circ.test() HOT 1
- Circ.test output
- CircTest does not supply the direction of change in the output table
- Multi-group testing broken HOT 3
- Error in -del_row : invalid argument to unary operator HOT 3
- Suggestion: Improvement to Circ.lineplot.R HOT 1
- Add circRNA/total count ratio HOT 2
- Question: FDR-corrected P value from circTest HOT 1
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