Generate, parse, and package manifests describing input and results from Siemens Teamplay. For a description of the format and why it exists, see teamplayManifest-common. There is also a corresponding Python project, teamplayManifest-py.

Manual:

git clone https://github.com/dnebdal/teamplayManifestR
R CMD INSTALL teamplayManifest

In R, if you have devtools or remotes installed:

# Pick one
devtools::install_github("dnebdal/teamplayManifestR")
remotes::install_github("dnebdal/teamplayManifestR")

The intended flow is something like this:

• User: Create a manifest with createManifest()
• User: Package the input files and manifest as a zip file with packageManifest()
• Teamplay middleware: Parse the manifest to route it to the right analysis container
• Analysis code: Parse the manifest with readManifest() to get a list of input files
• Analysis code: Update the manifest with finalizeManifest() to add a list of output files
• Analysis code: Package the output as a zip file with packageManifest()
• Teamplay middleware: Use the updated manifest to show the user a summary of a finished task?
• User: Optionally use the updated manifest to automatically do something with the results

For further reading see the help pages for those functions.