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2020-september-isoseq

Three day workshop offered in partnership with PacBio. Learn all about the possibilities of full length isoform sequencing from PacBio experts and experienced Core personnel!

3dmol.js

WebGL accelerated JavaScript molecular graphics library

algorithms_in_ipython_notebooks

A repository with IPython notebooks of algorithms implemented in Python.

align

sequence alignment. global, local, glocal.

am207

am207_2018

ann-visualizer

A python library for visualizing Artificial Neural Networks (ANN)

applied-computational-genomics

Applied Computational Genomics Course at UU: Spring 2017

appliedgenomics2019

Materials for Spring 2019 Applied Genomics Course

awesome

A curated list of awesome lists

awesome-bio

Collection of useful resources on Bioinformatics, data science, machine learning programming language (Python, Golang, R, Perl) and miscellaneous stuff.

awesome-conformal-prediction

awesome-courses

:books: List of awesome university courses for learning Computer Science!

basset

Convolutional neural network analysis for predicting DNA sequence activity.

bayesian-neural-network-blogpost

Building a Bayesian deep learning classifier

bios8366

Advanced Statistical Computing at Vanderbilt University's Department of Biostatistics

chip-seq-analysis

ChIP-seq analysis notes from Tommy Tang

chrisbangun.github.io

chromosomemappings

This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

computational-statistics-with-python

Resources for STA 633 class

cpat

Coding-Potential Assessment Tool using an alignment-free logistic regression model

cs231n

Public facing notes page

cytoscape.js-layout-demo

data-science-ipython-notebooks

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.

deep-learning-experiments

Notes and experiments to understand deep learning concepts

deep-learning-genomics-primer

Contains files for the deep learning in genomics primer.

deep-learning-with-python-notebooks

Jupyter notebooks for the code samples of the book "Deep Learning with Python"

deepbayes-2018

Seminars DeepBayes Summer School 2018

deeplearning_ai_books

deeplearning.ai（吴恩达老师的深度学习课程笔记及资源）

defragtrees

Python code for tree ensemble interpretation