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mlbook_code

Machine Learning: An Algorithmic Perspective, second edition

mli-resources

Machine Learning Interpretability Resources

mrec

mtctscanhelp

mTCTScan Help page

muts-needle-plot

A needle plot for mutation data

mypy

Optional static typing for Python 2 and 3 (PEP 484)

nci-webtools-dceg-linkage

network-clustering

Network Clustering in python

ngs-data-analysis-long-course

ols-graphview

Ontology visualisation widget for EBI's Ontology Lookup Service (OLS)

pdv

PDV: an integrative proteomics data viewer

pga

PGA: a tool for ProteoGenomics Analysis

phesant

PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank

pileup.js

Interactive in-browser track viewer

pnet_prostate_paper

P-NET, Biologically informed deep neural network for prostate cancer classification and discovery

pyprobml

Python code for "Machine learning: a probabilistic perspective"

pysnptools

A Python library for reading and manipulating genetic data.

python

All Algorithms implemented in Python

python-algorithms

This repository contains the code associated with the "Working With Algorithms In Python" Safari Video. http://shop.oreilly.com/product/110000667.do

python-data-structures

This repository contains the code associated with the "Designing Data Structures in Python: Principles & Practice" Safari Video. https://www.safaribooksonline.com/library/view/designing-data-structures/9781491928622/

python-machine-learning-book

The "Python Machine Learning" book code repository and info resource

python-machine-learning-book-2nd-edition

The "Python Machine Learning (2nd edition)" book code repository and info resource

r_tutorials

IQSS RTC workshop materials

rahul_codify

Data Sets of Youtube Channel Rahul_CODIFY

raincloudplots

Code and tutorials to visualise your data that is both beautiful *and* statistically valid

regtools

Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.

rnaseq_trinity_tuxedo_workshop

materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.

rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

scipy2014_tutorial

Tutorial: Bayesian Statistical Analysis in Python

scipy_2015_sklearn_tutorial

Scikit-Learn tutorial material for Scipy 2015