eead-csic-compbio / coexpression_motif_discovery Goto Github PK

Hi
I am using docker image for analysis. But Makefile is not running in one go, it is stopping after first step.

rsat_user@cde778d90cbd:~/rsat_results$ make -f peak-motifs.mk
Creating the result directories
Retrieving 4 upstream sequences boundaries from the genes of module M11
~/rsat_results/upstream1/regulonM11_up1.rm.fna
~/rsat_results/upstream2/regulonM11_up2.rm.fna
~/rsat_results/upstream3/regulonM11_up3.rm.fna
~/rsat_results/upstream4/regulonM11_up4.rm.fna
Retrieving 4 upstream sequences boundaries from all Prunus persica genome