Python implementation of NVR (neighborhood variance ratio) gene selection to select genes with local and monotonic variation (Welch et al., 2016). The selected genes possess specific expression patterns over the entire data space amenable to trajectory analysis.

There are two ways to install p-Creode with Mac/Linux operating systems.

git clone git://github.com/KenLauLab/NVR
cd NVR
sudo pip install .

sudo pip install nvr

In terminal, navigation to directory where you want to install NVR (e.g. d:\src)

cd d:\src
git clone git://github.com/KenLauLab/NVR
cd NVR
pip install .

Whereas the typical linux approach to importing the module is import NVR as nvr, an Windows/Anaconda2 installation will instead require import nvr.