An improved artificial bee colony algorithm for protein folding optimization
It has been tested under Window 8 with a Matlab R2012a environment.
The src
folder contains several subfolders with name of protein id from PDB database.
Each subfolder contains independent program for optimizating the protein struture using a balance-evolution artificial bee colony (BE-ABC) algorithm.
Click runmeLQ.me
to start the optimization.
Here is an example of the optimization process of protein 1AGT
Li B, Lin M, Liu Q, et al. Protein folding optimization based on 3D off-lattice model via an improved artificial bee colony algorithm[J]. Journal of molecular modeling, 2015, 21(10): 261.
This project is licensed under the MIT License - see the LICENSE.md file for details