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Fergus Cooper's Projects

odes icon odes

The ODES scikit for ordinary differential and algebraic equations, an extension to scipy

pyrho icon pyrho

Fast inference of fine-scale recombination rates based on fused-LASSO

pyrossgeo icon pyrossgeo

PyRossGeo is a numerical library for spatially resolved mathematical modelling of infectious diseases in Python - https://github.com/lukastk/PyRossGeo

rhe-mc icon rhe-mc

Efficient variance components analysis

std_rand icon std_rand

Investigate whether C++ random numbers drawn from standard distributions are the same across platforms

trase icon trase

A lightweight C++ plotting library

useful_scripts icon useful_scripts

Automated movie generation for immersed boundary simulations using Chaste

vcpkg icon vcpkg

C++ Library Manager for Windows, Linux, and MacOS

vertexcomparison2013 icon vertexcomparison2013

Chaste VertexComparison2013: code to accompany the paper "Implementing vertex dynamics models of cell populations in biology within a consistent computational framework"

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