It's Fernando Pozo's GitHub. I use to work in Bioinformatics, Data Science and Machine Learning tasks! 📊💻.

• trifid: Machine learning for protein isoform genome annotation.
• covid-rt: Bayesian estimation of virus effective reproduction number.

• Chest-X-Ray-with-Radiologist-AI: Web app for Chest X-Ray pathology assistance using CNNs and NLP.
• cxr-img-classifier: Pytorch Lighning + config + logger for an user friendly image binary classification with DL.

• pyops: Python Project template designed for a cool variety of projects

• nf-exec: Some Nextflow workflow management useful practices.
• appris-rnaseq: Comprehensive and extremely easy to manage RNA-seq pipeline.
• qsplice: Exon junction scores from RNA-seq data for the whole genome.
• phosphoproteomics: Several analysis to study post-translational modifications in proteins.
• ismb-presentation: Materials for presenting my PhD. thesis work in the biggest conference in Bioinformatics.
• eccb-22: Materials for the presentation at 21st European Conference on Computational Biology (ECCB).

• hp-pfamscan: HPC implementation protein families finder.

• advanced-bioinformatics-course: E2e university course in Bioinformatics applied to Genomics.
• machine-learning-in-healthcare: E2e university course in Machine Learning for Healthcare.

• Why and how should you start learning bioinformatics?
• Assessing the functional relevance of splice isoforms
• APPRIS principal isoforms and MANE Select transcripts in clinical variant interpretation