Name: Yuichi Shiraishi
Type: User
Company: National Cancer Center Research Institute
Bio: Bioinformatics, Cancer genome analysis, Statistics, Machine learning
Twitter: friend1_ws
Location: Tokyo
Blog: https://www.ncc.go.jp/en/ri/division/genome_analysis_platform_development/index.html
intron_retention_utils
script for extracting intron retention events
iravnet
intron retention associated variant detection project
junc_utils
utility functions for analyzing splicing junction
lda-practice
practice code for LDA
learningdeeplearning
Repository for saving memos, resource and thoughts on deep learning.
local_polishing_test
Test script for Nanopore sequence local polishing
mutrans
check the relationships between splicing changes and somatic mutations
my_utils
utility functions for myself
myutils
utility functions for personal use
mywgs
personal programs for analyzing whole genome sequencing data
nanobreak
Break point detection from nanopore sequencing data
nanomonsv
SV detection tool for nanopore sequence reads
nonb_db
Database for nonB database
onebreak
national cancer center break point
osub_spec
specification of osub
overlapmatch
investigating overlapping read pairs
pcawg3_scripts
my scripts for pcawg3 contribution
pdl1_pipeline
script for CD274 project
pmsignature
R package for extracting mutation signatures from a list of somatic mutations
pmsignature-cpp
software for extracting probabilstic mutation signatures from a mutation list
pmsignature_paper
script for generating figures in the pmsignature paper
pmsignature_shiny
shiny programis for pmsignature
pubmed_medline_parser
a program for parsing pubmed meddling format files
ranksynergy
a rank-based statistical test for measuring synergistic effects between two gene sets
readthedocs.org
The source code that powers readthedocs.org
saibo-kogaku-ngs
example script for saibo-kogaku
sampleproject
A sample project that exists for PyPUG's "Tutorial on Packaging and Distributing Projects"
savnet
detection of mutations causing splicing change
savnet_paper
resource for savant paper
sf3b1ness
R package for obtaining SF3B1ness score
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
