Related Issues (20)
- We need the ability to load Reactome biopax test files into Noctua-dev HOT 1
- Add NAS evidence code & reference to all Yeast Pathway models HOT 5
- Exclude "molecular event" for reactions that don't occur in yeast HOT 2
- Make appropriate pathways cyclical HOT 3
- GPAD export erroneous line for molecular_event as subject HOT 1
- TNF signaling (R-HSA-75893) and TNFR1-induced NF-kappa-B signaling pathway (R-HSA-5357956) HOT 1
- TNF signaling (R-HSA-75893) and TNFR1-induced proapoptotic signaling (R-HSA-5357786)
- TNFR1-mediated ceramide production (R-HSA-5626978)
- Heme biosynthesis (R-HSA-189451)
- Carnitine synthesis (R-HSA-71262)
- Add code to disentangle downstream events when the active unit is the same in two different reactions HOT 3
- If an input to a binding reaction contains the enabler, remove the corresponding input from the MF HOT 1
- Remove intervening Molecular Event between MFs and black box BPs HOT 2
- Define proper way of passing Drug type info from Reactome in BioPAX HOT 1
- Prioritization of Steps in Converting Molecular Events HOT 7
- Review the causal flow between EGFR(s) activity and Src activity
- First step: Import Reactome Pathways for MOD species HOT 6
- Second step: Add existing evidence to imported pathways HOT 1
- Third step: Use Textpresso-like resource to identify papers that could provide evidence for statements that aren't supported by evidence from existing annotations. HOT 1
- Represent enzymatic complex enablers according to GO-CAM spec HOT 11
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