Comments (2)
- Make it easy to build and run from command line.
from pathways2go.
falls under generalized cleanup for public group. Will make a new consolidated issue on that front.
from pathways2go.
Related Issues (20)
- Vitamin C (ascorbate) metabolism (R-HSA-196836)
- Insulin effects increased synthesis of Xylulose-5-Phosphate (R-HSA-163754)
- Generate stats for GO-CAM completeness used in manuscript
- Reactome Release #85 HOT 26
- Glucagon signaling in metabolic regulation ( R-HSA-163359) and PKA activation in glucagon signalling (R-HSA-164378)
- glucose metabolism patches HOT 1
- PKA-mediated phosphorylation of key metabolic factors (R-HSA-163358)
- Clean up EWASs with wrong modifiedResidue annotations
- Reactome: EWASs with wrong modified residues HOT 3
- Convert chemicals to ChEBI rather than Reacto HOT 7
- Aspartate and asparagine metabolism (R-HSA-8963693)
- Something is weird about the import of Regulation of glycolysis by fructose 2,6-bisphosphate metabolism - imported from: Reactome HOT 4
- Regulation of glycolysis by fructose 2,6-bisphosphate metabolism (R-HSA-9634600)
- Deprecated or suboptimal UniProtKB accessions referenced in Reactome HOT 7
- Same entity?
- Representation questions (more to add later; didn't want to lose the notes)
- Reaction intermediates: out of scope? HOT 1
- Regulation of ChREBP (MLXIPL) ( R-HSA-163765, R-HSA-163680, R-HSA-163358, R-HSA-163767) HOT 1
- Triglyceride biosynthesis (R-HSA-75109) HOT 1
- Reactome proteoforms that point to deleted UniProt entries HOT 4
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