George Carvalho's Projects
A tutorial on how to create bioinformatics pipelines as bash scripts, Makefiles and using tools like Nextflow.
Workshops presented by the Gladstone Bioinformatics Core
ClassifyCNV: a tool for clinical annotation of copy-number variants
Dockerfile images I have been using
Config files for my GitHub profile.
Some scripts from my path to learn Julia
Repository with study's code for Rust language
Code used to do part of my research project
Annotations from my studies in machine learning
Repository with learning materials related to New Generation Sequencing (NGS) analysis and processing
Nextflow workflow for PGx analysis
Python scripts resulted from my studies in data science using python
Repository to improve my abilities with R language focus on data science and bioinformatics
Call and score variants from WGS/WES of rare disease patients.
A tool for visualizing alignments of reads in regions containing tandem repeats
RNA-seq for Mendelian Disease Diagnostics
RNAseq workflow tutorial
Scripts with rosalind answers
Repository with codes used to study snakemake
Curso de Inverno para o III Simpósio Norte-Nordeste de Bioinformática (SNNB) - 2018
SSDP+ is an evolutionary approach for mining diverse and more informative subgroups focused on high dimensional data sets.
Tool to annotate outfiles from ExpansionHunter with the pathologic implications of the repeat
Toolset for SV simulation, comparison and filtering
:books: Relevant papers for CNV and SV approaches
Projects from subjects from my master's degree
My WDL tasks, wf, assets, scripts