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Gerben Voshol's Projects

lofreq icon lofreq

LoFreq Star: Sensitive variant calling from sequencing data

lvgl icon lvgl

Powerful and easy-to-use embedded GUI with many widgets, advanced visual effects (opacity, antialiasing, animations) and low memory requirements (16K RAM, 64K Flash).

lz4 icon lz4

Extremely Fast Compression algorithm

mauve icon mauve

Mauve is a system for constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion.

md4c icon md4c

C Markdown parser. Fast. SAX-like interface. Compliant to CommonMark specification.

md5tee icon md5tee

Program to calculate md5sum. Pipes data from stdin to stdout. Shows md5sum on stderr or file.

mic icon mic

A simple and easy-to-use library to build pipelines in C

miller icon miller

Miller is like awk, sed, cut, join, and sort for name-indexed data such as CSV, TSV, and tabular JSON

miniasm icon miniasm

Ultrafast de novo assembly for long noisy reads (though having no consensus step)

minimap2 icon minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

miniz icon miniz

miniz: Single C source file zlib-replacement library, originally from code.google.com/p/miniz

minizip icon minizip

Fork of the popular zip manipulation library found in the zlib distribution.

movgrab icon movgrab

Simple downloader for videos from various websites

mph icon mph

Perfect Hash Functions

mrrcrypt icon mrrcrypt

A command line encryption/decryption tool using an adaptive mirror field algorithm.

mypubs icon mypubs

creation of methods with the purpose of tools comparison

nnpack icon nnpack

Acceleration package for neural networks on multi-core CPUs

nthash icon nthash

Fast hash function for DNA sequences

odfs icon odfs

OneDrive Filesystem Driver for Linux

openblas icon openblas

OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.

pacbam icon pacbam

PaCBAM is a C command line tool for the complete characterization of genomic regions and single nucleotide positions from next-generation sequencing data.

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