Tool for visualizing protein binding motifs related to splicing.
See plot.svg for example output.
motif-mark.py
takes a fasta file in which each sequence must be of the form intronEXONintron. It also requires a text file of desired motifs separated by lines.
The output is a .svg file showing each gene and the positions of any query motifs.
A jupyter-notebook file is used for development of the script and is included in the repo.