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Notebooks for tree sequence workshops in 2022.
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The tree consists of nodes, which represent the alleles held by different chromosomes in the history of the sample, and edges, which represent genealogical relationships between the alleles.
But I think it might be read as the nodes representing alleles (which they don't, of course). We normally say that the nodes represent genomes, I think? The genomes can carry mutations, which result in alleles being observed.
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