haobinzhou / get_mr Goto Github PK
View Code? Open in Web Editor NEWA package for running MR In batches and in parallel quickly
License: GNU General Public License v3.0
A package for running MR In batches and in parallel quickly
License: GNU General Public License v3.0
我输入的表格如上,但是运行之后,显示: |
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================================================== |
[1] "一共有0个SNP成功匹配EAF,占比0%" |
[1] "一共有0个SNP是major allele,EAF被计算为1-MAF,在成功匹配数目中占比NaN%" |
[1] "一共有604个SNP在1000G中找不到,占比100%" |
[1] "一共有0个SNP在输入数据与1000G中效应列与参照列,将剔除eaf,占比0%" |
[1] "输出数据中的type列说明:" |
[1] "raw:EAF直接等于1000G里的MAF数值,因为效应列是minor allele" |
[1] "corrected:EAF等于1000G中1-MAF,因为效应列是major allele" |
[1] "error:输入数据与1000G里面提供的数据完全不一致,比如这个SNP输入的效应列是C,参照列是G,但是1000G提供的是A-T,这种情况下,EAF会被清空(NA),当成匹配失败" |
您好,安装您的r包的时候用不了在线安装,本地安装提示没有 (no DESCRIPTION)文件,这种情况怎么处理呀,是因为我用的是macos? 期待您的回复
devtools::install_local("Get_MR-main.zip")
Error: Failed to install 'Get' from local:
Does not appear to be an R package (no DESCRIPTION)
目前是没办法下载代码zip了吗?
Hi,
Thank you so much for the very nice software. When I run the software using test data, a error showed as follows, Error in sample.int(length(x), size, replace, prob) :
cannot take a sample larger than the population when 'replace = FALSE'
I didn't known what happened and do you know how to deal with them? Thanks a lot.
Lee
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