Error PEMA ASV inference: Directory swarm does not exists about pema HOT 5 CLOSED

      } else if ( params{'clusteringAlgo'} == 'algo_Swarm' ) {
         string algo = 'Swarm'
         algo.mkdir()
      }

bash: warning: setlocale: LC_ALL: cannot change locale (en_US.UTF-8)
/home/scripts/dereplicateSwarm.sh: line 99: 29689 Killed                  awk 'BEGIN {FS = "[>_]"}

     # Parse the sample files
     /^>/ {contingency[$2][FILENAME] = $3
           amplicons[$2] += $3
           if (FNR == 1) {
               samples[++i] = FILENAME
           }
          }

     END {# Create table header
          printf "amplicon"
          s = length(samples)
          for (i = 1; i <= s; i++) {
              printf "\t%s", samples[i]
          }
          printf "\t%s\n", "total"

          # Sort amplicons by decreasing total abundance (use a coprocess)
          command = "LC_ALL=C sort -k1,1nr -k2,2d"
          for (amplicon in amplicons) {
               printf "%d\t%s\n", amplicons[amplicon], amplicon |& command
          }
          close(command, "to")
          FS = "\t"
          while ((command |& getline) > 0) {
              amplicons_sorted[++j] = $2
          }
          close(command)

          # Print the amplicon occurrences in the different samples
          n = length(amplicons_sorted)
          for (i = 1; i <= n; i++) {
               amplicon = amplicons_sorted[i]
               printf "%s", amplicon
               for (j = 1; j <= s; j++) {
                   printf "\t%d", contingency[amplicon][samples[j]]
               }
               printf "\t%d\n", amplicons[amplicon]
          }}' linearized.dereplicate* > ../amplicon_contingency_table.tsv
Fatal error: /home/modules/preprocess.bds, line 449, pos 5. Exec failed.
	Exit value : 137
	Command    :  bash /home/scripts/dereplicateSwarm.sh
pema_latest.bds, line 103 :	if ( paramsDereplication{'clusteringAlgo'} == 'algo_Swarm' ) {
pema_latest.bds, line 106 :	   swarmDereplicate(paramsDereplication, globalVars)
preprocess.bds, line 445 :	string swarmDereplicate(string{} params, string{} globalVars){
preprocess.bds, line 449 :	    sys bash $globalVars{'path'}/scripts/dereplicateSwarm.sh